Dask · Bioinformatics

Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3).

davila7/claude-code-templates

Infers candidate gene regulatory networks from bulk or single-cell expression data using AertsLab Arboreto GRNBoost2 and GENIE3.

K-Dense-AI/scientific-agent-skills

Stores and operates on sparse expression matrices for single-cell and large bulk RNA-seq, covering dgCMatrix/dgRMatrix/dgTMatrix when-each-is-fast, the dgCMatrix (CSC, R) <- CSR (Python) implicit…

GPTomics/bioSkills

GRN inference from expression via GRNBoost2 (gradient boosting) or GENIE3 (Random Forest).

jaechang-hits/SciAgent-Skills