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PubMed · By jaechang-hits
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Programmatic PubMed access via NCBI E-utilities REST API. An agent skill from jaechang-hits/SciAgent-Skills. | jaechang-hits/ | 374 | 1 repo | ~4.4k | Automated safety check: Pass | CC-BY-4.0 | 12 days ago |
| 2 | Molecular biology toolkit: sequence manipulation, FASTA/GenBank/PDB I/O, NCBI Entrez, BLAST automation, pairwise/MSA alignment, Bio.PDB, phylogenetic trees. | jaechang-hits/ | 374 | 1 repo | ~6k | Automated safety check: Pass | BSD-3-Clause | 12 days ago |
| 3 | Systematic strategies for searching scientific literature across PubMed, arXiv, Google Scholar, and AI-assisted tools. | jaechang-hits/ | 374 | 1 repo | ~5.7k | Automated safety check: Pass | CC-BY-4.0 | 12 days ago |
| 4 | Query bioRxiv/medRxiv preprints via REST API. An agent skill from jaechang-hits/SciAgent-Skills. | jaechang-hits/ | 374 | 1 repo | ~5.1k | Automated safety check: Pass | CC0-1.0 | 12 days ago |
| 5 | Query OpenAlex REST API for 250M+ scholarly works, authors, institutions, journals, concepts. | jaechang-hits/ | 374 | 1 repo | ~4.8k | Automated safety check: Pass | CC0-1.0 | 12 days ago |
| 6 | HuggingFace Transformers with biomedical LMs (BioBERT, PubMedBERT, BioGPT, BioMedLM) for scientific NLP: NER (genes, diseases, chemicals), relation extraction, QA, text classification, abstract… | jaechang-hits/ | 374 | 1 repo | ~4.9k | Automated safety check: Pass | Apache-2.0 | 12 days ago |
| 7 | ENA REST API for sequences, reads, assemblies, and annotations. | jaechang-hits/ | 374 | 1 repo | ~5.3k | Automated safety check: Pass | Unknown | 12 days ago |
| 8 | Conducting systematic, scoping, and narrative literature reviews. | jaechang-hits/ | 374 | — | ~4.1k | Automated safety check: Pass | CC-BY-4.0 | 12 days ago |
