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Scanpy · By TianGzlab
4 skills found.
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Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | 1.Sc De Load when finding marker genes per cluster or comparing condition expression in single-cell RNA-seq. | TianGzlab/ | 161 | — | ~2.3k | Automated safety check: Pass | Apache-2.0 | 4 days ago |
| 2 | Load when ranking cluster-level marker genes from a clustered single-cell AnnData via Scanpy Wilcoxon / t-test / logreg or COSG specificity. | TianGzlab/ | 161 | — | ~2.2k | Automated safety check: Pass | Apache-2.0 | 4 days ago |
| 3 | Load when computing per-cell pathway / gene-set scores on a normalised scRNA AnnData via AUCell (R or Python) or Scanpy scoregenes. | TianGzlab/ | 161 | — | ~2.2k | Automated safety check: Pass | Apache-2.0 | 4 days ago |
| 4 | Load when normalising QC'd scRNA into a PCA-ready AnnData via scanpy / Seurat / SCTransform / Pearson residuals. | TianGzlab/ | 161 | — | ~2.8k | Automated safety check: Pass | Apache-2.0 | 4 days ago |
