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PubMed · By ClawBio
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Semantic Similarity Index for disease research literature using PubMedBERT embeddings | ClawBio/ | 1.2k | 3 repos | ~1.4k | Automated safety check: Pass | MIT | 2 days ago |
| 2 | 2.Bgpt MCP Search scientific papers via the BGPT MCP server and retrieve structured experimental data — methods, results, conclusions, quality scores, and 25+ metadata fields per paper. | ClawBio/ | 1.2k | 1 repo | ~3.2k | Automated safety check: Pass | MIT | 2 days ago |
| 3 | Search PubMed and bioRxiv for bioinformatics literature, synthesise results into a structured report, and build a citation graph — all locally, with a reproducibility bundle. | ClawBio/ | 1.2k | 1 repo | ~2.5k | Automated safety check: Pass | MIT | 2 days ago |
| 4 | Given an article DOI or PubMed ID, discover and download the genomics data files deposited by the authors (VCF, FASTA, H5AD, CSV, JSON, BAM, etc.) from public repositories such as GEO, ENA, Zenodo… | ClawBio/ | 1.2k | — | ~4k | Automated safety check: Pass | MIT | 2 days ago |
| 5 | Search PubMed, preserve complete abstracts and sections, and produce research briefings with abstract openings or optional OpenAI/Ollama summaries. | ClawBio/ | 1.2k | — | ~3.3k | Automated safety check: Pass | MIT | 2 days ago |
