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Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Plans and structures academic decks for conference talks, seminars, thesis defenses and grant briefings, with argument-first slides, and leaves file creation to the PPTX skill. | Gabberflast/ | 1.1k | 1 repo | ~1.9k | Automated safety check: Pass | Proprietary | 2 mo ago |
| 2 | A skill your agent uses when the user wants a research paper, arXiv/DOI link, or research topic turned into academic slides — journal club / lab meeting (组会汇报), thesis defense (答辩幻灯片), or conference… | luwill/ | 862 | — | ~1.9k | Automated safety check: Pass | MIT | yesterday |
| 3 | 做机构级研究报告与学术论文——行业报告、白皮书、年度调研、数据洞察、arXiv论文，也含16:9咨询deck型报告（一页一结论）。定结构、写发现、建图表视觉系统。规范提炼自2026年顶级机构报告实测。单篇文章、纯演示PPT不适用（走design/slides）。 | alchaincyf/ | 447 | — | ~1.4k | Automated safety check: Pass | MIT | 27 days ago |
| 4 | A skill your agent uses when the user needs help choosing or organizing an academic-writing workflow by deliverable, stage, or format, including review articles, guided reading, paper sections, PPT… | ZimoLiao/ | 577 | — | ~827 | Automated safety check: Pass | MIT | 16 days ago |
| 5 | Creates or revises a Chinese-language academic PPTX deck from a scientific paper or reading notes, reusing the paper's figures and adding speaker notes. | Yuan1z0825/ | 47k | — | ~1.1k | Automated safety check: Pass | Apache-2.0 | today |
| 6 | 6.Referee2 Systematic audit and review by Referee 2. An agent skill from scunning1975/MixtapeTools. | scunning1975/ | 474 | 2 repos | ~2.4k | Automated safety check: Pass | No licence | 1 mo ago |
| 7 | 7.Pathml Computational pathology toolkit for analyzing whole-slide images (WSI) and multiparametric imaging data. | davila7/ | 33k | 11 repos | ~1.9k | Automated safety check: Pass | MIT | today |
| 8 | Generate a co-author / collaborator handoff brief for a multi-author, multi-machine project — summarizing what changed since the last brief (git delta), the current state of each artifact… | pedrohcgs/ | 1.7k | — | ~2.9k | Automated safety check: Notes | MIT | 13 days ago |
| 9 | Generates Beamer LaTeX PDF and editable PPTX slides from a compiled paper, with speaker notes and an optional talk script, sized to four talk lengths. | Orchestra-Research/ | 13k | — | ~2.5k | Automated safety check: Pass | MIT | 3 mo ago |
| 10 | 10.Pathml Supports local computational pathology research with PathML: slide loading and tiling, preprocessing and QC, h5path storage, multiplex quantification, spatial graphs, and bounded model inference. | K-Dense-AI/ | 48k | 1 repo | ~3.3k | Automated safety check: Notes | MIT | 6 days ago |
| 11 | 11.Output Produce a user-facing DELIVERABLE (report, brief, literature review, slide deck, table, email, outline, …) into the output/ directory — grounded in the wiki and strictly following the user's… | HurricaHjz/ | 123 | — | ~2k | Automated safety check: Pass | MIT | 9 days ago |
| 12 | 12.Deepspot M Generates transcriptome-wide virtual spatial transcriptomics from H&E histology with DeepSpot-M. | K-Dense-AI/ | 48k | 1 repo | ~2.5k | Automated safety check: Notes | PolyForm-Noncommercial-1.0.0 | 6 days ago |
| 13 | Map scRNA-seq atlases onto spatial transcriptomics slides using omicverse's Single2Spatial workflow for deep-forest training, spot-level assessment, and marker visualisation. | FreedomIntelligence/ | 3.1k | 2 repos | ~994 | Automated safety check: Pass | No licence | 2 mo ago |
| 14 | Load spatial transcriptomics data from Visium, Xenium, MERFISH, Slide-seq, and other platforms using Squidpy and SpatialData. | FreedomIntelligence/ | 3.1k | 1 repo | ~2k | Automated safety check: Pass | No licence | 2 mo ago |
| 15 | Analyze high-resolution spatial platforms like Slide-seq, Stereo-seq, and Visium HD. | FreedomIntelligence/ | 3.1k | 1 repo | ~1.6k | Automated safety check: Pass | No licence | 2 mo ago |
| 16 | Reconstructs single cells from sub-cellular spatial capture units (Visium HD 2um bins, Stereo-seq DNB spots, Slide-seqV2 beads) by aggregating bins UP into cells rather than deconvolving a mixture… | GPTomics/ | 1.2k | 1 repo | ~3.7k | Automated safety check: Pass | MIT | 1 mo ago |
| 17 | Identify spatially coherent tissue domains (regions like cortical layers, tumor vs stroma) in Visium, Visium HD, Xenium, MERFISH, Slide-seq, and Stereo-seq data with Squidpy, BANKSY, BayesSpace… | GPTomics/ | 1.2k | 1 repo | ~4.8k | Automated safety check: Pass | MIT | 1 mo ago |
| 18 | Guide users through omicverse's spatial transcriptomics tutorials covering preprocessing, deconvolution, and downstream modelling workflows across Visium, Visium HD, Stereo-seq, and Slide-seq… | FreedomIntelligence/ | 3.1k | 1 repo | ~3.7k | Automated safety check: Pass | No licence | 2 mo ago |
| 19 | Multi-agent review for research presentation slides in the sewage-house-prices project (visual, econometric fidelity, proofreading, substance). | brycewang-stanford/ | 4.6k | — | ~750 | Automated safety check: Pass | Unknown | 6 days ago |
| 20 | Generate journal club slides with background, critique, and discussion. | aipoch/ | 1.9k | — | ~1.8k | Automated safety check: Pass | MIT | 24 days ago |
| 21 | WSI processing for digital pathology. An agent skill from jaechang-hits/SciAgent-Skills. | jaechang-hits/ | 374 | 1 repo | ~5.8k | Automated safety check: Notes | Apache-2.0 | 12 days ago |
| 22 | Rewrites technical research content into a structured lay summary that cross-disciplinary teams can quickly understand and act on. | aipoch/ | 1.9k | — | ~1k | Automated safety check: Pass | MIT | 24 days ago |
| 23 | Verifies whether a scientific or biomedical claim is actually supported by the cited original papers rather than by citation drift, overstatement, selective citation, or correlation-to-causation… | aipoch/ | 1.9k | — | ~3.8k | Automated safety check: Pass | MIT | 24 days ago |
| 24 | Method for scalable identification of spatially variable genes (SVGs) in spatially-resolved transcriptomics data. | bioMate-AI/ | 804 | — | ~925 | Automated safety check: Pass | Unknown | 3 mo ago |
| 25 | SpotClean is a computational method to adjust for spot swapping in spatial transcriptomics data. | bioMate-AI/ | 804 | — | ~1.5k | Automated safety check: Pass | Unknown | 3 mo ago |
