Research & Science · By aipoch

Standardize fragmented experimental steps into reproducible protocol documents when you need method organization, lab SOP drafting, or cross-operator reproducibility; missing parameters must be…

aipoch/medical-research-skills

A Python library for working with DICOM (Digital Imaging and Communications in Medicine) files.

aipoch/medical-research-skills

Based on user input, directly find relevant literature or automatically construct PubMed Boolean search queries to retrieve and filter references suitable for citation.

aipoch/medical-research-skills

Write competitive research proposals for NSF, NIH, DOE, DARPA, and Taiwan's NSTC when you need agency-compliant narratives, budgets, and review-criteria alignment for a specific solicitation/FOA/BAA.

aipoch/medical-research-skills

Auto-annotate cell clusters from single-cell RNA data using marker genes.

aipoch/medical-research-skills

An intelligent tool for precision medical literature search using PubMed's E-utilities API.

aipoch/medical-research-skills

Generate structured shift handover summaries from EHR records, highlighting critical events, vital sign changes, and pending tasks for incoming clinical staff.

aipoch/medical-research-skills

Map spatial transcriptomics data from 10x Genomics Visium/Xenium onto.

aipoch/medical-research-skills

Automated generation of baseline characteristics tables (Table 1) for clinical research papers.

aipoch/medical-research-skills

Generate publication-ready baseline characteristics tables (Table 1) for clinical research papers with automatic variable type detection, appropriate statistics (mean±SD, median[IQR, n(%)), group…

aipoch/medical-research-skills

Generates a comprehensive research proposal design based on input literature, including hypothesis, mechanism verification, and budget.

aipoch/medical-research-skills

Designs primary aims, secondary aims, and testable hypotheses from broad biomedical research ideas.

aipoch/medical-research-skills

Designs cell-based and animal-based validation plans that translate computational, omics, biomarker, genetic, or clinical findings into experimentally testable validation routes.

aipoch/medical-research-skills

Evidence-based medical knowledge and research mentor grounded in the Bian Que tradition.

aipoch/medical-research-skills

Generates complete bidirectional multi-phenotype Mendelian randomization research designs from a user-provided exposure family and outcome family.

aipoch/medical-research-skills

Identifies translationally meaningful paths for bioinformatics findings by mapping omics or computational discoveries to diagnosis, stratification, prognosis, treatment-response, monitoring, or…

aipoch/medical-research-skills

Scans the biomarker landscape of a disease area by biomarker type, clinical/research use case, evidence layer, validation status, and maturity level.

aipoch/medical-research-skills

Use Bio.Entrez to access NCBI databases (e.g., PubMed/GenBank) for searching, fetching summaries, and downloading records when your workflow needs to call the NCBI E-utilities API over the network.

aipoch/medical-research-skills

Programmatically query the CZ CELLxGENE Census (61M+ cells) when you need cross-tissue, disease, or cell-type expression data for population-scale queries and reference atlas comparisons.

aipoch/medical-research-skills

Clarifies a vague clinical or biomedical research idea into a structured, bounded, searchable, researchable, and testable question.

aipoch/medical-research-skills

Generates complete comorbidity-oriented shared-biomarker bioinformatics research designs from a user-provided disease pair and validation direction.

aipoch/medical-research-skills

Plans confounder control, variable adjustment logic, and bias mitigation strategies at the protocol stage for clinical, epidemiologic, translational, observational, and biomarker studies.

aipoch/medical-research-skills

Generates complete conventional non-oncology bioinformatics research designs from a user-provided disease context, process-related gene family or biological theme, and validation direction.

aipoch/medical-research-skills

Generates complete conventional oncology bulk-transcriptome biomarker and hub-gene research designs from a user-provided cancer type and study direction.

aipoch/medical-research-skills

Generates complete cross-disease shared-biomarker bioinformatics research designs from a user-provided disease pair and validation direction.

aipoch/medical-research-skills

Systematically maps mechanism evidence for a disease from molecules to pathways, cell types, tissues, biological consequences, and clinical phenotypes.

aipoch/medical-research-skills

DNAnexus cloud genomics platform. An agent skill from aipoch/medical-research-skills.

aipoch/medical-research-skills

Access the European Nucleotide Archive (ENA) via REST APIs and FTP/Aspera to search and retrieve sequences, raw reads (FASTQ), assemblies, and metadata when you have accession IDs or need…

aipoch/medical-research-skills

Designs primary, secondary, and exploratory endpoints for biomedical and clinical research protocols.

aipoch/medical-research-skills

Generates complete FAERS-style pharmacovigilance disproportionality research designs from a user-provided drug class, comparator strategy, adverse-event domain, and patient-group stratification.

aipoch/medical-research-skills

Designs a realistic, execution-aware biomedical study version under explicit constraints of samples, time, budget, data access, lab capacity, team skill, and validation resources.

aipoch/medical-research-skills

Generates complete phenotype-scoring bioinformatics research designs for any disease context and any user-defined phenotype, pathway, process, signature, or molecular program.

aipoch/medical-research-skills

Builds clear, executable, and auditable inclusion and exclusion criteria for biomedical and clinical research protocols.

aipoch/medical-research-skills

This skill is applicable when using LaminDB. An agent skill from aipoch/medical-research-skills.

aipoch/medical-research-skills

Extends a mechanistic or association-level biomedical finding into a staged validation pathway that moves from descriptive evidence toward stronger functional support, mechanistic specificity, and…

aipoch/medical-research-skills

Converts an audited medical research gap into a complete, structured, gap-traceable study design.

aipoch/medical-research-skills

Maps whether a biomedical research topic, subtopic, or study angle is truly saturated, superficially crowded, strategically occupied, or still open for differentiated entry.

aipoch/medical-research-skills

Generates complete Mendelian randomization study designs from a user-provided exposure and outcome direction.

aipoch/medical-research-skills

Medical literature search strategy generator. An agent skill from aipoch/medical-research-skills.

aipoch/medical-research-skills

Detects methodological gaps across study design, analysis, validation, bias control, reproducibility, and implementation readiness within a biomedical research area.

aipoch/medical-research-skills

Reverse-engineers the methods section of a biomedical paper into a structured, reproducible workflow.

aipoch/medical-research-skills

Turns your protocol and analysis workflow into publication-ready Methods text.

aipoch/medical-research-skills

Generates complete Mendelian Randomization + single-cell transcriptomics (scRNA-seq) research designs from a user-provided direction.

aipoch/medical-research-skills

Collects candidate biomedical literature across multiple databases, adapts search logic by database, preserves source metadata, and organizes results into a structured, screening-ready candidate pool.

aipoch/medical-research-skills

Verifies whether a scientific or biomedical claim is actually supported by the cited original papers rather than by citation drift, overstatement, selective citation, or correlation-to-causation…

aipoch/medical-research-skills

Generates complete programmed-cell-death (PCD) / regulated-cell-death (RCD) bulk-transcriptome oncology research designs from a user-provided disease and mechanism theme.

aipoch/medical-research-skills

Detects overlooked, underrepresented, weakly resolved, or poorly validated populations and subgroups within a biomedical research area so users can identify more precise and meaningful study…

aipoch/medical-research-skills

Compares multiple study-route options for the same biomedical research question and recommends one primary plan, while explicitly explaining why alternative routes are secondary, premature, weaker…

aipoch/medical-research-skills