Databases

Harmonizes already-normalized per-omic matrices onto a common footing before joint integration - assembling a MultiAssayExperiment, choosing the per-omic variance-stabilizing transform, deciding…

GPTomics/bioSkills

Joint genotype a cohort of per-sample gVCFs with GATK (HaplotypeCaller -ERC GVCF - GenomicsDBImport or CombineGVCFs - GenotypeGVCFs) or GLnexus for DeepVariant gVCFs, producing a squared-off…

GPTomics/bioSkills

Left-align and trim indels to parsimonious canonical form, decompose MNPs (atomize), and split multiallelic variants with bcftools norm.

GPTomics/bioSkills

Tauri 插件开发与集成技能，指导如何使用官方插件和开发自定义插件. An agent skill from bkywksj/knowledge-base.

bkywksj/knowledge-base

Tauri 项目工具函数和常用 crate 技能，提供 Rust 和 TypeScript 的实用工具集. An agent skill from bkywksj/knowledge-base.

bkywksj/knowledge-base

Universal SQL performance optimization assistant for comprehensive query tuning, indexing strategies, and database performance analysis across SQL databases (PostgreSQL, SQL Server, Oracle).

totvs/engpro-advpl-tlpp-skills

Query the grapher MySQL database (local dev, a branch's staging server, or production via the public Datasette) and verify indicators and charts on a staging server.

owid/etl

Deploy and operate apps on Sealos Cloud: sign in to a Sealos account, deploy any project or self-hosted app (from the template store, an official Docker image, or project source code), provision…

hashgraph-online/awesome-codex-plugins

Guides adding or modifying a feature in the HOT-Step CPP Node/TypeScript server (Express route + service pattern, better-sqlite3 schema changes, engine calls via aceClient, logging, tsx watch dev…

scragnog/HOT-Step-CPP

Evaluates, configures, and migrates workloads to AWS Lambda Managed Instances (LMI).

aws/agent-toolkit-for-aws

Runs SQL queries on CloudWatch Logs data exported as Apache Iceberg tables in S3 Tables.

aws/agent-toolkit-for-aws

Enables Redshift system-table (SYS) log publishing to S3 Tables in Apache Iceberg format for both Provisioned clusters and Serverless namespaces, verifies publishing status, and queries the…

aws/agent-toolkit-for-aws

Queries S3 object metadata, tracks bucket activity, audits object changes, searches annotations, and analyzes storage metrics using S3 Metadata system tables (journal, inventory, annotation) and S3…

aws/agent-toolkit-for-aws

Advises on Amazon RDS open-source engines (MySQL, MariaDB, PostgreSQL) for instance creation, upgrade planning, commitment pricing, proxy evaluation, and Blue/Green deployments.

aws/agent-toolkit-for-aws

Staff+ DBA SQL patterns targeting what Claude's defaults miss - multi-column statistics, operator classes, keyset pagination, silent performance anti-patterns.

rileyhilliard/claude-essentials

Validate the replication package for the sewage-house-prices project.

brycewang-stanford/Auto-Empirical-Research-Skills

Prepare a replication package for the sewage-house-prices project.

brycewang-stanford/Auto-Empirical-Research-Skills

Screening Assistant - AI-PRISMA 6-dimension screening with Groq LLM (100x cheaper) Supports two project types with different confidence thresholds Use when: screening papers, PRISMA screening…

brycewang-stanford/Auto-Empirical-Research-Skills

Run a full 6-phase autonomous replication of a biomedical/epidemiology paper against UK Biobank or similar cohort data, producing Python and R scripts plus a validated replication report.

brycewang-stanford/Auto-Empirical-Research-Skills

A skill your agent uses when starting empirical analysis, creating a data pipeline, generating results, or when data or model specifications change.

brycewang-stanford/Auto-Empirical-Research-Skills

Final submission verification gate for the sewage-house-prices paper.

brycewang-stanford/Auto-Empirical-Research-Skills

Use Dune MCP through UXC for blockchain table discovery, SQL query creation/execution, execution result retrieval, and visualization with help-first schema inspection, explicit auth binding, and…

holon-run/uxc

Creating, editing, and managing extensions — sandboxed Alpine.js mini-apps that run inside iframes.

BuilderIO/agent-native

Format prompts for different LLM providers with chat templates and HNSW-powered context retrieval

ruvnet/ruflo

Run a mastering pass (LUFS loudness normalization + peak limiting) on an existing production

ruvnet/ruflo

Build NodeTool document ingestion, vector indexing, retrieval, and RAG pipelines.

nodetool-ai/nodetool

Guides through installation, configuration, and first-time setup of the Claude Patent Creator system.

RobThePCGuy/Claude-Patent-Creator

Diagnoses and resolves MCP server registration failures, GPU detection, BigQuery authentication, index build failures, import errors, search quality issues, and performance problems.

RobThePCGuy/Claude-Patent-Creator

Design data systems by understanding storage engines, replication, partitioning, transactions, and consistency models.

wondelai/skills

Reads from, writes to, and manages relational databases using MATLAB Database Toolbox.

matlab/matlab-agentic-toolkit

Change Compozy SQLite tables, columns, indexes, constraints, triggers, or seed data under internal/store using append-only Goose migrations and owning generators.

compozy/compozy

Change apps/api — an endpoint or controller, a route's @RouteAccess, a service's accessibleQuery scoping, a Prisma model or a CASL permission — or an environment variable anywhere in the repo.

DouglasNeuroInformatics/OpenDataCapture

Read and write Notion data using Python + notion-client SDK.

OpenMinis/MinisSkills

Database design and migration patterns for Alembic migrations, schema design (SQL/NoSQL), and database versioning.

yonatangross/orchestkit

Guide customers through building an inbound lead-routing workflow in Clay Workflows.

clay-run/agent-plugins

A skill your agent uses when the user asks to generate a surface slab from a bulk crystal, specifying Miller indices, number of layers, vacuum thickness, or supercell size.

Hello-QM/catgo-LRG

Generates SvelteKit + sql.js dashboards with LLM-built UI. An agent skill from pawbytes/skill-suites.

pawbytes/skill-suites

SQLi and NoSQLi hunting - error-based, boolean-blind, time-based, UNION, NoSQL operator injection.

Encod3d-Sec/TORCH

SQL query optimization and database performance specialist. An agent skill from aiskillstore/marketplace.

aiskillstore/marketplace

Developer Experience specialist for tooling, setup, and workflow optimization.

aiskillstore/marketplace

Quick reference for common SQL patterns, CTEs, window functions, and indexing strategies.

aiskillstore/marketplace

Expanding the candidate pool via relevance feedback, as an alternative to reranking when a dense retriever is too weak.

qdrant/skills

Guidance for SQL query optimization tasks. An agent skill from lazyFrogLOL/Harness_Engineering.

lazyFrogLOL/Harness_Engineering

Guides building on Qdrant Edge, the embedded in-process shard.

qdrant/skills

Setting up and running Qdrant Hybrid Cloud on your own Kubernetes cluster (managed, on-prem, or edge): prerequisites, storage/CSI and backups, installing the Qdrant Cloud agent and operator…

qdrant/skills

Explains hybrid search in Qdrant. An agent skill from qdrant/skills.

qdrant/skills

Fusing scores from multiple searches into a single ranked result (RRF, DBSF, custom fusion).

qdrant/skills

Constructing prefetch queries for hybrid retrieval, including sparse/dense and multi-field setups, and choosing a sparse embedding model.

qdrant/skills