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Data & Analytics · Python · By aipoch
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Generate R/Python code for volcano plots from DEG (Differentially Expressed Genes) analysis results. | aipoch/ | 1.9k | — | ~2.5k | Automated safety check: Pass | MIT | 23 days ago |
| 2 | Unified Python access to 40+ bioinformatics web services; use when you need to query multiple databases (e.g., UniProt/KEGG/ChEMBL/Reactome) with one consistent API in a single workflow, especially… | aipoch/ | 1.9k | — | ~1.7k | Automated safety check: Pass | MIT | 23 days ago |
| 3 | Batch-unify typography (font family, size, italics) for Word table cells and embedded charts; use when you need consistent formatting across theses/reports without changing body text. | aipoch/ | 1.9k | — | ~3k | Automated safety check: Pass | MIT | 23 days ago |
| 4 | Generates a Meta-analysis results section description for funnel plots, including statistical tables (Egger's, Begg's, Trim & Fill) and figure legends. | aipoch/ | 1.9k | — | ~1.4k | Automated safety check: Pass | MIT | 23 days ago |
| 5 | 5.Pydeseq Differential gene expression analysis for bulk RNA-seq count matrices using a DESeq2-like workflow in Python; use when you need Wald tests, FDR correction, and optional LFC shrinkage for… | aipoch/ | 1.9k | — | ~1.8k | Automated safety check: Pass | MIT | 23 days ago |
| 6 | Comprehensive tool for computational mass spectrometry using PyOpenMS; use when you need to read/write MS formats (mzML/mzXML/MGF), run signal processing (smoothing/peak picking), detect isotope… | aipoch/ | 1.9k | — | ~852 | Automated safety check: Pass | MIT | 23 days ago |
| 7 | A Python library for reading, writing, and analyzing geospatial vector data; use it when you need spatial operations (buffer/overlay/join), CRS reprojection, or map visualization on formats like… | aipoch/ | 1.9k | — | ~2k | Automated safety check: Pass | MIT | 23 days ago |
| 8 | Predict neoantigens that may be recognized by the immune system based. | aipoch/ | 1.9k | — | ~3.8k | Automated safety check: Pass | MIT | 23 days ago |
| 9 | 9.Plotly Interactive visualization library for Python. An agent skill from aipoch/medical-research-skills. | aipoch/ | 1.9k | — | ~2.7k | Automated safety check: Pass | MIT | 23 days ago |
| 10 | 10.Scikit Bio A Python bioinformatics toolkit for sequence, phylogeny, and microbiome/community-ecology analysis; use it when you need to compute diversity/ordination/statistics from biological data and standard… | aipoch/ | 1.9k | — | ~1.4k | Automated safety check: Pass | MIT | 23 days ago |
| 11 | A comprehensive toolkit for survival analysis and time-to-event modeling in Python using scikit-survival; use it when you need to model censored time-to-event outcomes, fit Cox/RSF/GB models or… | aipoch/ | 1.9k | — | ~1.6k | Automated safety check: Pass | MIT | 23 days ago |
| 12 | Analyze data with survival-curve-risk-table using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation. | aipoch/ | 1.9k | — | ~4.2k | Automated safety check: Pass | MIT | 23 days ago |
| 13 | Analyze data with toxicity-structure-alert using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation. | aipoch/ | 1.9k | — | ~2.6k | Automated safety check: Pass | MIT | 23 days ago |
| 14 | Generate meta-analysis forest plots for binary classification data. | aipoch/ | 1.9k | — | ~2.1k | Automated safety check: Pass | MIT | 23 days ago |
| 15 | Generate forest plots for meta-analysis of survival data. An agent skill from aipoch/medical-research-skills. | aipoch/ | 1.9k | — | ~2k | Automated safety check: Pass | MIT | 23 days ago |
| 16 | Generate publication-quality sequence logos for DNA or protein motifs. | aipoch/ | 1.9k | — | ~2.2k | Automated safety check: Pass | MIT | 23 days ago |
| 17 | DNAnexus cloud genomics platform. An agent skill from aipoch/medical-research-skills. | aipoch/ | 1.9k | — | ~3.5k | Automated safety check: Pass | MIT | 23 days ago |
