Backend & APIs · NCBI

Download large datasets from NCBI efficiently using EPost, history server, batching, rate limiting, and retry logic.

GPTomics/bioSkills

Query the Ensembl REST API for gene/transcript/protein lookup, sequence retrieval, comparative genomics (Compara), variant effect prediction (VEP), regulatory features, and cross-species…

GPTomics/bioSkills

Query the NCBI Gene database via E-utilities and the NCBI Datasets API; use it when you need to search genes by symbol/ID and retrieve annotations (RefSeq, GO, location, phenotype) for single or…

aipoch/medical-research-skills

Tests gene lists, ranked vectors, and fold-change vectors against KEGG pathways and modules with clusterProfiler enrichKEGG/enrichMKEGG (ORA), gseKEGG (GSEA), and SPIA/graphite (signed-topology…

GPTomics/bioSkills

Query ClinVar for variant pathogenicity classifications, review status, and disease associations via REST API or local VCF.

FreedomIntelligence/OpenClaw-Medical-Skills

KEGG REST API (academic only). An agent skill from jaechang-hits/SciAgent-Skills.

jaechang-hits/SciAgent-Skills

Biodiversity data access, species occurrence, and ecological tools

wentorai/research-plugins

Run sequence similarity searches via the NCBI BLAST REST API

wentorai/research-plugins

Query NCBI dbSNP for SNP records by rsID, gene, or region via E-utilities and Variation Services REST API.

jaechang-hits/SciAgent-Skills