Docsagent
docsagent/docsagent
Search and manage private, local document collections (PDF, PPTX, DOCX) offline.
A skill your agent uses when the user wants to import papers from Endnote XML/RIS, Zotero Web API or local SQLite, attach PDFs, match PDFs to records, or supplement records with PDF content.
$ npx skills add ZimoLiao/scholaraio --skill import -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install ZimoLiao/scholaraio import --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/ZimoLiao/scholaraio.git skills-src && mkdir -p .claude/skills && cp -r skills-src/.claude/skills/import .claude/skills/import && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "import" agent skill from https://github.com/ZimoLiao/scholaraio/tree/main/.claude/skills/import into .claude/skills/import/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "import", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/ZimoLiao/scholaraio/tree/main/.claude/skills/importType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add ZimoLiao/scholaraio --skill import -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install ZimoLiao/scholaraio import --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/ZimoLiao/scholaraio.git skills-src && mkdir -p .agents/skills && cp -r skills-src/.claude/skills/import .agents/skills/import && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "import" agent skill from https://github.com/ZimoLiao/scholaraio/tree/main/.claude/skills/import into .agents/skills/import/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "import", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add ZimoLiao/scholaraio --skill import -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install ZimoLiao/scholaraio import --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/ZimoLiao/scholaraio.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/.claude/skills/import .cursor/skills/import && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "import" agent skill from https://github.com/ZimoLiao/scholaraio/tree/main/.claude/skills/import into .cursor/skills/import/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "import", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/ZimoLiao/scholaraio.git --path .claude/skills/import--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add ZimoLiao/scholaraio --skill import -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install ZimoLiao/scholaraio import --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/ZimoLiao/scholaraio.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/.claude/skills/import .gemini/skills/import && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "import" agent skill from https://github.com/ZimoLiao/scholaraio/tree/main/.claude/skills/import into .gemini/skills/import/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "import", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install ZimoLiao/scholaraio importInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add ZimoLiao/scholaraio --skill import -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/ZimoLiao/scholaraio.git skills-src && mkdir -p .github/skills && cp -r skills-src/.claude/skills/import .github/skills/import && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "import" agent skill from https://github.com/ZimoLiao/scholaraio/tree/main/.claude/skills/import into .github/skills/import/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "import", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add ZimoLiao/scholaraio --skill import -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install ZimoLiao/scholaraio import --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/ZimoLiao/scholaraio.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/.claude/skills/import .opencode/skills/import && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "import" agent skill from https://github.com/ZimoLiao/scholaraio/tree/main/.claude/skills/import into .opencode/skills/import/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "import", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
importA skill your agent uses when the user wants to import papers from Endnote XML/RIS, Zotero Web API or local SQLite, attach PDFs, match PDFs to records, or supplement records with PDF content.
Import is an agent skill from ZimoLiao/scholaraio. Use when the user wants to import papers from Endnote XML/RIS, Zotero Web API or local SQLite, attach PDFs, match PDFs to records, or supplement records with PDF content.
Its SKILL.md is about 790 tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Documents & Office, covering PDF and Citation management. It works with Zotero and SQLite. The repository describes itself as: Scholar All-In-One: A research infrastructure for AI agents. The licence is MIT.
4 steps, taken from the first numbered list in SKILL.md.
Read from SKILL.md and the folder at commit 777628b. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md (its code samples are bash, yaml and python).
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names these keys or tokens, usually read from environment variables:
COLLECTION_KEYFrom names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Import loads about 790 tokens when it runs. Until then it costs about 44 tokens; SKILL.md has 151 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from ZimoLiao/scholaraio at commit 777628b, republished under its MIT licence (© ZimoLiao). 151 words, ~790 tokens.
.claude/skills/import/SKILL.md (or your agent's skills folder).支持从 Endnote / Zotero 批量导入,或为已入库论文补充/重拉 PDF(attach-pdf、fetch-pdf)。
支持 Endnote 导出的 XML 和 RIS 格式文件。
# 完整导入:元数据 + PDF 匹配 + MinerU 批量转换 + enrich (toc/l3/abstract) + embed + index
scholaraio import-endnote <file.xml>
# 多文件导入
scholaraio import-endnote file1.xml file2.ris
# 仅导入元数据和 PDF,跳过 MinerU 转换和 enrich
scholaraio import-endnote <file.xml> --no-convert
# 预览模式
scholaraio import-endnote <file.xml> --dry-run
# 离线模式
scholaraio import-endnote <file.xml> --no-api对 Endnote XML 文件,自动解析 internal-pdf:// 链接,从 <library>.Data/PDF/ 目录匹配 PDF:
默认行为(不带 --no-convert)下,导入完成后自动执行完整 pipeline:
convert_pdfs_cloud_batch() 批量转换(批次大小由 config.yaml ingest.mineru_batch_size 控制,默认 20)使用 --no-convert 跳过以上全部后处理(仅导入元数据 + PDF 复制 + embed + index)。
支持 Web API 和本地 SQLite 两种模式。
# 列出 collections
scholaraio import-zotero --api-key KEY --library-id ID --list-collections
# 完整导入
scholaraio import-zotero --api-key KEY --library-id ID
# 仅导入指定 collection
scholaraio import-zotero --api-key KEY --library-id ID --collection COLLECTION_KEY
# 导入后将 collections 创建为工作区
scholaraio import-zotero --api-key KEY --library-id ID --import-collectionsscholaraio import-zotero --local /path/to/zotero.sqlite在 config.local.yaml 中配置 Zotero 凭据:
zotero:
api_key: "your-zotero-api-key"
library_id: "your-library-id"已有本地 PDF 文件时:
scholaraio attach-pdf <paper-id> <path/to/paper.pdf> [--force]自动把原始 PDF 保存到论文目录中(与 paper.md 同级,使用论文目录同名 stem),调用 MinerU 转换 PDF → markdown,补全缺失的 abstract,增量更新 embed + index。若目标目录已有 canonical PDF,默认拒绝覆盖;确认要替换时使用 --force。
当前网络环境有正版访问权限、希望从出版社页面或 DOI 拉取 PDF 时:
# 拉取新论文 PDF 到 configured inbox;校园网直连时加 --direct 可绕过代理环境变量
scholaraio fetch-pdf 10.xxxx/example --direct
# 拉取后立刻走普通论文入库流程
scholaraio fetch-pdf 10.xxxx/example --direct --ingest
# 为已入库单篇论文重新拉取 canonical PDF;已有 PDF 时需要 --force
scholaraio fetch-pdf --paper <paper-id> --direct --force
# 为指定多篇论文批量重新拉取 PDF
scholaraio fetch-pdf --paper <paper-id-1> <paper-id-2> --direct --force
# 批量为全库论文重新拉取 PDF
scholaraio fetch-pdf --all --direct --forcefetch-pdf 只做 PDF 获取,不做访问绕过;能否下载取决于用户当前网络、机构权限和 publisher 返回的 PDF 链接。它会优先使用 source_url,否则使用 DOI。重拉已有论文不会自动重新转换 paper.md。
对已入库但缺少 paper.md 的论文(如首次导入时用了 --no-convert),可通过 Python 调用批量转换:
from scholaraio.core.config import load_config
from scholaraio.services.ingest.pipeline import batch_convert_pdfs
cfg = load_config()
stats = batch_convert_pdfs(cfg, enrich=True)自动扫描 configured papers library 中有 PDF 无 paper.md 的论文,云端模式使用批量 API 转换,完成后运行 abstract backfill + toc + l3 + embed + index。
© ZimoLiao, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Just SKILL.md in .claude/skills/import of ZimoLiao/scholaraio.
Open the folder on GitHubat commit 777628b
Import next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Import this skillZimoLiao/scholaraio | 577 | — | ~790 | Automated safety check: Pass | MIT | |
| Docsagentdocsagent/docsagent | 625 | — | ~834 | Automated safety check: Pass | None | |
| Ref Downloaderltczding-gif/ref-downloader | 139 | — | ~5.9k | Automated safety check: Pass | MIT | |
| Obsidian Paper VaultAperivue/medsci-skills | 333 | — | ~1.6k | Automated safety check: Pass | MIT | |
| Research Vault Literature Retrievalcheneternity/Research-Vault-Literature-Retrieval | 292 | — | ~2.3k | Automated safety check: Pass | None | |
| Experiment Detail Comparatoraipoch/medical-research-skills | 1.9k | — | ~3.3k | Automated safety check: Notes | MIT |
docsagent/docsagent
Search and manage private, local document collections (PDF, PPTX, DOCX) offline.
ltczding-gif/ref-downloader
A skill your agent uses when the user asks to batch-download academic PDFs with ref-downloader — either ALL references of one paper (Mode A: DOI or PDF input), OR a custom batch of papers (Mode B…
Aperivue/medsci-skills
A skill your agent uses when turning a folder of research PDFs into Obsidian notes, even if Obsidian is not named.
cheneternity/Research-Vault-Literature-Retrieval
ResearchVault 文献知识问题的默认检索技能。先从当前 Vault 的 Analytical Notes 定位相关论文,再按需要定向进入对应 Fulltext,必要时回到 Zotero PDF 验证。若用户明确要求基于当前项目文件检索,优先执行严格的项目文件检索后再回答。纯 Skill、代码、Git、文件整理和转换工具调试任务不自动触发文献检索。
aipoch/medical-research-skills
Compare experimental method details between two Zotero PDF papers, identify protocol differences (ratios, dosages, timing, conditions), search supporting literature to explain why they differ, and…
54yyyu/zotero-mcp
Read the open paper and write study annotations into its PDF with zotero-cli - a context box on the title, a four-part summary on the abstract, role-coded abstract highlights, one box per figure…
ZimoLiao/scholaraio
A skill your agent uses when the user wants to create or inspect DOCX, PPTX, or XLSX files, generate a downloadable Office deliverable, or verify its structure and layout warnings with scholaraio…
ZimoLiao/scholaraio
A skill your agent uses when the user needs help choosing or organizing an academic-writing workflow by deliverable, stage, or format, including review articles, guided reading, paper sections, PPT…
ZimoLiao/scholaraio
A skill your agent uses when the user wants to browse arXiv preprints, search arXiv directly, fetch a PDF by arXiv ID or URL, or send a preprint into the ScholarAIO ingest pipeline.
ZimoLiao/scholaraio
A skill your agent uses when working on bioinformatics workflows such as alignment, variant calling, phylogenetics, or protein-structure analysis, especially across BLAST, minimap2, samtools…
ZimoLiao/scholaraio
A skill your agent uses when the user wants to verify citations in AI-generated or human-written text against the local knowledge base and catch hallucinated, wrong, or missing references.
ZimoLiao/scholaraio
A skill your agent uses when the user wants diagrams, flowcharts, architecture visuals, data relationships, timelines, concept maps, Mermaid, Graphviz, drawio, or polished paper figures generated…
Categories
A skill your agent uses when the user wants to import papers from Endnote XML/RIS, Zotero Web API or local SQLite, attach PDFs, match PDFs to records, or supplement records with PDF content. Import is an agent skill from ZimoLiao/scholaraio. Use when the user wants to import papers from Endnote XML/RIS, Zotero Web API or local SQLite, attach PDFs, match PDFs to records, or supplement records with PDF content.
Import fits situations like: the user wants to import papers from Endnote XML/RIS; match PDFs to records; supplement records with PDF content.
Run `npx skills add ZimoLiao/scholaraio --skill import -a claude-code`. Or copy the skill folder (.claude/skills/import in ZimoLiao/scholaraio) into .claude/skills/import in your project. Claude Code loads it when a task matches its description.
Run `npx skills add ZimoLiao/scholaraio --skill import -a codex`. Or copy the skill folder (.claude/skills/import in ZimoLiao/scholaraio) into .agents/skills/import in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add ZimoLiao/scholaraio --skill import -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/import, .gemini/skills/import, .github/skills/import and .opencode/skills/import in your project.
Going by SKILL.md and its folder, Import needs credentials named COLLECTION_KEY. Our summary lists: Python 3; A credential in COLLECTION_KEY.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Import is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 790 tokens (SKILL.md is roughly 3.2k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Import: Docsagent (docsagent/docsagent, 625 stars), Ref Downloader (ltczding-gif/ref-downloader, 139 stars), Obsidian Paper Vault (Aperivue/medsci-skills, 333 stars) and Research Vault Literature Retrieval (cheneternity/Research-Vault-Literature-Retrieval, 292 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
ZimoLiao (a GitHub user) maintains it in ZimoLiao/scholaraio, which has 577 GitHub stars. The repository holds 43 skills in this directory. The repository was last updated on September 25, 2026.
Source: ZimoLiao/scholaraio on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.