Agent skill

Second Brain Query

by undefined-ui in undefined-ui/second-brain-os

Answer a question from a second-brain vault by reading its own pages, citing the pages used, and saying plainly when the vault does not contain the answer.

MITAuto-check passedKnowledge Management

Install Second Brain Query

skills CLI
$ npx skills add undefined-ui/second-brain-os --skill second-brain-query -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install undefined-ui/second-brain-os second-brain-query --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/undefined-ui/second-brain-os.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/second-brain-query .claude/skills/second-brain-query && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
second-brain-query
GitHub stars
999
Token cost
~550 tokens
SKILL.md length
254 words
Files
1
Skills in repo
23
Repo updated
First seen
Licence
MIT

At a glance

Answer a question from a second-brain vault by reading its own pages, citing the pages used, and saying plainly when the vault does not contain the answer.

  • Works in 5 steps: Start from index.md, not from a… → Follow links outward from the most… → Answer in plain language, with [[page]]… → …
  • The user asks what they know about a topic
  • SKILL.md covers Core rule, Workflow, Output format and Calibration
  • Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md

What it does

Second Brain Query is an agent skill from undefined-ui/second-brain-os. Answer a question from a second-brain vault by reading its own pages, citing the pages used, and saying plainly when the vault does not contain the answer. Use this skill whenever the user asks what they know about a topic, what they have read on something, what connects two ideas, what they have changed their mind about, or asks any question that should be answered from their own notes rather than general knowledge. Do NOT use for ingesting new material, for general questions the vault has nothing to do with, or…

Its SKILL.md is about 550 tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

It sits in Knowledge Management, covering Second brain. The repository describes itself as: An AI second brain that maintains itself. Full guide, starter vault, agent skills and scripts for a self-organizing knowledge base in Claude Code and Obsidian. The licence is MIT.

When your agent uses it

  • The user asks what they know about a topic
  • What they have read on something
  • What connects two ideas
  • What they have changed their mind about

Example prompts

  • “/second-brain-query”

Workflow steps

5 steps, taken from the first numbered list in SKILL.md.

  1. Start from index.md, not from a full-text sweep. The index is the map;
  2. Follow links outward from the most relevant pages, one hop at a time.
  3. Answer in plain language, with [[page]] references inline.
  4. Name the gaps. If the question has three parts and the vault covers two,
  5. Offer the next move when there is an obvious one: a source worth

What it can do on your machine

Read from SKILL.md and the folder at commit d6861cc. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    No scripts in the folder and no shell commands in SKILL.md.

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Second Brain Query loads about 550 tokens when it runs. Until then it costs about 149 tokens; SKILL.md has 254 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~149
When it runs · the whole SKILL.md, loaded when a task matches
~550

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from undefined-ui/second-brain-os at commit d6861cc, republished under its MIT licence (© undefined-ui). 254 words, ~550 tokens.

Download SKILL.mdSave it as .claude/skills/second-brain-query/SKILL.md (or your agent's skills folder).
name
second-brain-query
description
Answer a question from a second-brain vault by reading its own pages, citing the pages used, and saying plainly when the vault does not contain the answer. Use this skill whenever the user asks what they know about a topic, what they have read on something, what connects two ideas, what they have changed their mind about, or asks any question that should be answered from their own notes rather than general knowledge. Do NOT use for ingesting new material, for general questions the vault has nothing to do with, or when the user explicitly wants an answer from the open web.

Query the vault

A query that quietly falls back on general knowledge is the most damaging thing this system can do. The owner built the vault so answers would be grounded in what they actually read, and an answer that blends the model's priors with their notes is worse than no answer, because it cannot be checked.

Core rule

Every claim in the answer comes from a page in the vault and names that page. Anything you know but the vault does not is labelled as outside knowledge or left out.

Workflow

  1. Start from index.md, not from a full-text sweep. The index is the map; reading it first keeps the context budget for actual pages.
  2. Follow links outward from the most relevant pages, one hop at a time. Stop when new pages stop adding anything.
  3. Answer in plain language, with [[page]] references inline.
  4. Name the gaps. If the question has three parts and the vault covers two, say which one it does not.
  5. Offer the next move when there is an obvious one: a source worth ingesting, a synthesis page worth writing.

Output format

Plain prose, then:

Read: <pages consulted>
Not covered: <what the vault does not answer>

Calibration

Reading too little is the common failure: answering from three pages when the vault has fifteen relevant ones. Reading everything is the opposite failure and burns the budget on pages that add nothing.

If the vault has nothing on the topic, say so in one sentence and stop. Do not pad the answer with general knowledge to avoid an empty result.

© undefined-ui, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

Just SKILL.md in skills/second-brain-query of undefined-ui/second-brain-os.

Open the folder on GitHubat commit d6861cc

Compare with similar skills

Second Brain Query next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Second Brain Query compared with similar skills
SkillStarsUsed inTokensAuto-checkLicenceRepo updated
Second Brain Query this skillundefined-ui/second-brain-os999—~550Automated safety check: PassMIT
Obsidian Canvas BoardsAgriciDaniel/claude-obsidian15k—~1.4kAutomated safety check: PassMIT
3D Brainnateherkai/AIS-OS1.6k—~2.1kAutomated safety check: PassCustom licence
Icm ArchitectRinDig/icm-architect1.8k—~3.2kAutomated safety check: PassMIT
Second BrainNicholasSpisak/second-brain735—~1.5kAutomated safety check: NotesNone
Cascading Goal Trackerballred/obsidian-claude-pkm1.9k—~1.5kAutomated safety check: PassMIT

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    15k GitHub stars~1.4k tokensUpdated 26 days ago
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More from undefined-ui/second-brain-os

All 23 skills in this repo
  • Context Audit

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    Audit an agent's context layout against the four places: system prompt, tools, history, tail.

    999 GitHub stars~810 tokensUpdated 8 days ago
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  • Evals Bootstrap

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    Scaffold a first eval suite for an agent: mine real failures into cases, write behavioural checks over traces, and generate the runner.

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  • Gate Check

    undefined-ui/second-brain-os

    Find the decisions in a pipeline that do not need the expensive model and propose the gate for each: a rule, a classic classifier, or a small model, with fail-closed routing.

    999 GitHub stars~861 tokensUpdated 8 days ago
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  • Goal Test

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    Turn a vague task into a testable definition of done and generate an executable goal-test script for it, optionally with a bounded retry loop around a headless agent.

    999 GitHub stars~761 tokensUpdated 8 days ago
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  • Harness Audit

    undefined-ui/second-brain-os

    Audit an agent's harness against the four rings: containment, guides, sensors, permissions.

    999 GitHub stars~862 tokensUpdated 8 days ago
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  • Second Brain Chat Import

    undefined-ui/second-brain-os

    Triage an exported chat history into what to ingest, what to archive and what to delete, with a privacy pass first.

    999 GitHub stars~527 tokensUpdated 8 days ago
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Questions about Second Brain Query

What does Second Brain Query do?

Answer a question from a second-brain vault by reading its own pages, citing the pages used, and saying plainly when the vault does not contain the answer. Second Brain Query is an agent skill from undefined-ui/second-brain-os. Answer a question from a second-brain vault by reading its own pages, citing the pages used, and saying plainly when the vault does not contain the answer.

When should I use Second Brain Query?

Second Brain Query fits situations like: the user asks what they know about a topic; what they have read on something; what connects two ideas; what they have changed their mind about.

How do I install Second Brain Query in Claude Code?

Run `npx skills add undefined-ui/second-brain-os --skill second-brain-query -a claude-code`. Or copy the skill folder (skills/second-brain-query in undefined-ui/second-brain-os) into .claude/skills/second-brain-query in your project. Claude Code loads it when a task matches its description.

How do I install Second Brain Query in Codex?

Run `npx skills add undefined-ui/second-brain-os --skill second-brain-query -a codex`. Or copy the skill folder (skills/second-brain-query in undefined-ui/second-brain-os) into .agents/skills/second-brain-query in your project. Codex loads it when a task matches its description.

Can I use Second Brain Query in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add undefined-ui/second-brain-os --skill second-brain-query -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/second-brain-query, .gemini/skills/second-brain-query, .github/skills/second-brain-query and .opencode/skills/second-brain-query in your project.

What does Second Brain Query need to run?

SKILL.md names no scripts, command-line tools or credentials: Second Brain Query is instructions for the agent only.

Does Second Brain Query access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Second Brain Query safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Second Brain Query use?

Second Brain Query is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Second Brain Query use?

About 550 tokens (SKILL.md is roughly 2.2k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Second Brain Query?

Skills that share tags, products or a category with Second Brain Query: Obsidian Canvas Boards (AgriciDaniel/claude-obsidian, 15k stars), 3D Brain (nateherkai/AIS-OS, 1.6k stars), Icm Architect (RinDig/icm-architect, 1.8k stars) and Second Brain (NicholasSpisak/second-brain, 735 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Second Brain Query?

undefined-ui (a GitHub user) maintains it in undefined-ui/second-brain-os, which has 999 GitHub stars. The repository holds 23 skills in this directory. The repository was last updated on September 29, 2026.

Source: undefined-ui/second-brain-os on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.