Agent skill

Deep Research Agent

by shobcoder in shobcoder/shob

Comprehensive research agent for in-depth investigation. An agent skill from shobcoder/shob.

MITAuto-check passedResearch & Science

Install Deep Research Agent

skills CLI
$ npx skills add shobcoder/shob --skill deep-research-agent -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install shobcoder/shob deep-research-agent --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/shobcoder/shob.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/deep-research-agent .claude/skills/deep-research-agent && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
deep-research-agent
GitHub stars
577
Token cost
~1.9k tokens
SKILL.md length
664 words
Files
1
Skills in repo
6
Repo updated
First seen
Licence
MIT

At a glance

Comprehensive research agent for in-depth investigation. An agent skill from shobcoder/shob.

  • Works in 5 steps: Query Decomposition & Planning → Autonomous Information Gathering → Content Reading & Reasoning → …
  • Users ask for deep research
  • SKILL.md covers Core Workflow, Execution Guidelines, Example Research Queries and Constraints
  • Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md

What it does

Deep Research Agent is an agent skill from shobcoder/shob. Comprehensive research agent for in-depth investigation. Use when users ask for deep research, comprehensive analysis, market research, academic surveys, competitive analysis, technology trends, or any topic requiring 100+ source verification. Triggers on requests like "investigate", "research", "analyze", "create a report", "comprehensive report", "deep dive", "thorough analysis".

Its SKILL.md is about 1.9k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

It sits in Research & Science, covering Deep research. The repository describes itself as: Shob – an AI agent that delivers high-quality coding & automation work. The licence is MIT.

When your agent uses it

  • Users ask for deep research
  • Comprehensive analysis
  • Market research
  • Academic surveys

Example prompts

  • “investigate”
  • “research”
  • “analyze”
  • “/deep-research-agent”

Workflow steps

5 steps, taken from the step headings in SKILL.md.

  1. Query Decomposition & Planning
  2. Autonomous Information Gathering
  3. Content Reading & Reasoning
  4. Verification & Gap Filling
  5. Structured Report Synthesis

What it can do on your machine

Read from SKILL.md and the folder at commit 14831ba. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    No scripts in the folder and no shell commands in SKILL.md (its code samples are json).

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Deep Research Agent loads about 1.9k tokens when it runs. Until then it costs about 101 tokens; SKILL.md has 664 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~101
When it runs · the whole SKILL.md, loaded when a task matches
~1.9k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from shobcoder/shob at commit 14831ba, republished under its MIT licence (© shobcoder). 664 words, ~1,866 tokens.

Download SKILL.mdSave it as .claude/skills/deep-research-agent/SKILL.md (or your agent's skills folder).
name
deep-research-agent
description
Comprehensive research agent for in-depth investigation. Use when users ask for deep research, comprehensive analysis, market research, academic surveys, competitive analysis, technology trends, or any topic requiring 100+ source verification. Triggers on requests like "investigate", "research", "analyze", "create a report", "comprehensive report", "deep dive", "thorough analysis".

DeepResearch Agent

Autonomous multi-phase research agent that decomposes queries, gathers information from diverse sources, verifies facts, and synthesizes structured reports with 100+ source citations.

Core Workflow

Phase 1: Query Decomposition & Planning

Input: User's research query (natural language)

Process:

  1. Analyze the query intent

    • Identify the primary research objective
    • Determine required expertise domains (History/Technology/Market/Challenges/Regulations etc.)
    • Assess depth requirements (surface-level vs comprehensive)
  2. Generate multi-dimensional search queries

    • Historical context queries (when applicable)
    • Technical specification queries
    • Market/industry trend queries
    • Challenge/pain point queries
    • Regulatory/compliance queries (if applicable)
    • Future outlook/prediction queries
  3. Build investigation roadmap

    • Define search priority order
    • Identify cross-cutting themes
    • Plan for iterative deep-diving
    • Set minimum source targets per topic area

Output: research_plan object containing:

json
{
  "primary_topic": "string",
  "sub_topics": ["string"],
  "search_queries": [{"query": "string", "domain": "string", "priority": 1}],
  "target_sources": 100,
  "timeline_phases": ["phase1", "phase2", "phase3"]
}
Phase 2: Autonomous Information Gathering

Tools Used: batch_web_search, extract_content_from_websites

Process:

  1. Initial breadth search

    • Execute parallel searches across all primary query dimensions
    • Gather minimum 20-30 URLs per major topic area
    • Prioritize authoritative sources (official docs, academic, established media)
  2. Source classification

    • Categorize by source type: News, Academic Papers, Whitepapers, Technical Documentation, Forums, Blogs
    • Assess domain authority and reliability
    • Flag sources requiring deeper analysis
  3. Iterative deep-diving

    • Extract key terms and concepts from initial results
    • Generate follow-up queries using discovered terminology
    • Expand search to related topics and subtopics
    • Loop until saturation (no new significant information)
  4. Diverse source coverage

    • Ensure geographic diversity (US/EU/Asia when relevant)
    • Cover multiple stakeholder perspectives
    • Include both primary and secondary sources

Target: Minimum 100 unique, verified sources

Phase 3: Content Reading & Reasoning

Tools Used: extract_content_from_websites, extract_pdfs_key_info

Process:

  1. Content extraction

    • Access each promising URL
    • Extract structured information: facts, statistics, quotes, dates, claims
    • Parse PDF documents for detailed data
  2. Relevance assessment

    • Score content against research objectives (1-5 scale)
    • Filter out low-relevance or duplicate content
    • Prioritize high-value sources for deep analysis
  3. Information extraction matrix

    For each source:
    - Source metadata (title, author, date, URL)
    - Key findings (bullet points)
    - Supporting evidence (quotes, statistics)
    - Contradicting information (if any)
    - Confidence level (high/medium/low)
  4. Pattern recognition

    • Identify consensus areas (multiple sources agree)
    • Detect controversy or debate points
    • Find knowledge gaps or underreported aspects
Phase 4: Verification & Gap Filling

Process:

  1. Cross-verification protocol

    • Check consistency across independent sources
    • Verify statistics with multiple citations
    • Confirm quotes with original context
  2. Contradiction resolution

    • Document conflicting information
    • Assess source credibility differences
    • Note the nature of disagreement (factual vs interpretive)
    • Present multiple perspectives when resolution impossible
  3. Gap identification

    • Compare gathered information against research plan
    • Identify missing perspectives or outdated information
    • Flag areas needing additional primary source verification
  4. Iteration loop (if gaps identified)

    • Return to Phase 2 with targeted queries
    • Focus on specific missing elements
    • Repeat until research objectives are satisfied
Show full SKILL.md (261 more words)Show less
Phase 5: Structured Report Synthesis

Output Format: Comprehensive research report

Structure:

# [Research Title]

## Executive Summary
[2-3 paragraph overview of key findings]

## 1. Background and Purpose
[Context and research motivation]

## 2. Key Findings

### 2.1 [Topic Area 1]
#### Facts and Data
#### Analysis and Interpretation
#### Sources

### 2.2 [Topic Area 2]
... (repeat for all sub-topics)

## 3. Market Trends and Future Outlook
[Aggregated trends and predictions]

## 4. Challenges and Risks
[Identified challenges with evidence]

## 5. Opportunities and Recommendations
[Actionable insights]

## 6. List of Sources
[All 100+ sources in academic citation format]

## Appendix
[Supplementary data, tables, charts]

Quality Standards:

  • Every factual claim MUST have inline citation [source_id]
  • Source attribution format: [1] Title, Publisher/Site, Publication Date, URL
  • Minimum 100 unique sources required
  • Use tables for statistical comparisons
  • Include key quotes with proper attribution
  • Mark uncertain information with confidence indicators

Execution Guidelines

Parallel Execution Strategy
  • Run independent searches in parallel (up to 10 concurrent queries)
  • Process multiple content extractions simultaneously
  • Batch similar operations for efficiency
Quality Thresholds
  • Source minimum: 100 unique URLs successfully extracted
  • Citation minimum: 100 inline references in final report
  • Content relevance: Average score >= 3.0 out of 5
  • Source diversity: Minimum 3 different source types represented
Error Handling
  • Failed URLs: Log and skip, continue with alternative sources
  • Contradictory info: Document and present both perspectives
  • Insufficient coverage: Extend search phase until threshold met
  • Verification failures: Flag claims as unverified in final report
Progress Tracking

Maintain research log with:

  • Sources examined (with success/failure status)
  • Key findings per sub-topic
  • Verification status
  • Remaining gaps

Example Research Queries

This skill excels at:

  • "Investigate the latest trends in AI technology using 100+ sources"
  • "Electric vehicle market trends 2024 comprehensive analysis"
  • "Research on industrial applications of quantum computing"
  • "Sustainable energy transition analysis with 100+ sources"
  • "Create a comprehensive market research report on [any specialized field]"

Constraints

  • Time budget: Allow sufficient iteration time for 100+ source verification
  • Source validation: All statistics must have minimum 3 source verification
  • Bias awareness: Include diverse perspectives, not just mainstream views
  • Currency: Prioritize recent sources (within 2 years) for current topics
  • Language: Support English and other major languages as needed

© shobcoder, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

Just SKILL.md in skills/deep-research-agent of shobcoder/shob.

Open the folder on GitHubat commit 14831ba

Compare with similar skills

Deep Research Agent next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Deep Research Agent compared with similar skills
SkillStarsUsed inTokensAuto-checkLicenceRepo updated
Deep Research Agent this skillshobcoder/shob577—~1.9kAutomated safety check: PassMIT
GitHub Deep Researchbytedance/deer-flow83k5 repos~1.3kAutomated safety check: PassMIT
Deep Research WorkflowTokenRhythm/opensquilla7.1k—~1.3kAutomated safety check: PassApache-2.0
X Researchrohunvora/x-research-skill1.2k1 repos~1.6kAutomated safety check: PassNone
Deep Researchsanjay3290/ai-skills43010 repos~683Automated safety check: NotesApache-2.0
ResearchWeizhena/Deep-Research-skills2.3k3 repos~1.1kAutomated safety check: PassMIT

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Questions about Deep Research Agent

What does Deep Research Agent do?

Comprehensive research agent for in-depth investigation. An agent skill from shobcoder/shob. Deep Research Agent is an agent skill from shobcoder/shob. Comprehensive research agent for in-depth investigation.

When should I use Deep Research Agent?

Deep Research Agent fits situations like: users ask for deep research; comprehensive analysis; market research; academic surveys.

How do I install Deep Research Agent in Claude Code?

Run `npx skills add shobcoder/shob --skill deep-research-agent -a claude-code`. Or copy the skill folder (skills/deep-research-agent in shobcoder/shob) into .claude/skills/deep-research-agent in your project. Claude Code loads it when a task matches its description.

How do I install Deep Research Agent in Codex?

Run `npx skills add shobcoder/shob --skill deep-research-agent -a codex`. Or copy the skill folder (skills/deep-research-agent in shobcoder/shob) into .agents/skills/deep-research-agent in your project. Codex loads it when a task matches its description.

Can I use Deep Research Agent in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add shobcoder/shob --skill deep-research-agent -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/deep-research-agent, .gemini/skills/deep-research-agent, .github/skills/deep-research-agent and .opencode/skills/deep-research-agent in your project.

What does Deep Research Agent need to run?

SKILL.md names no scripts, command-line tools or credentials: Deep Research Agent is instructions for the agent only.

Does Deep Research Agent access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Deep Research Agent safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Deep Research Agent use?

Deep Research Agent is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Deep Research Agent use?

About 1.9k tokens (SKILL.md is roughly 7.5k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Deep Research Agent?

Skills that share tags, products or a category with Deep Research Agent: GitHub Deep Research (bytedance/deer-flow, 83k stars), Deep Research Workflow (TokenRhythm/opensquilla, 7.1k stars), X Research (rohunvora/x-research-skill, 1.2k stars) and Deep Research (sanjay3290/ai-skills, 430 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Deep Research Agent?

shobcoder (a GitHub organization) maintains it in shobcoder/shob, which has 577 GitHub stars. The repository holds 6 skills in this directory. The repository was last updated on September 18, 2026.

Source: shobcoder/shob on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.