GitHub Deep Research
bytedance/deer-flow
Researches a GitHub repository over four rounds using the GitHub API and web search, then writes a structured markdown report with timeline, metrics and Mermaid diagrams.
Comprehensive research agent for in-depth investigation. An agent skill from shobcoder/shob.
$ npx skills add shobcoder/shob --skill deep-research-agent -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install shobcoder/shob deep-research-agent --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/shobcoder/shob.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/deep-research-agent .claude/skills/deep-research-agent && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "deep-research-agent" agent skill from https://github.com/shobcoder/shob/tree/main/skills/deep-research-agent into .claude/skills/deep-research-agent/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research-agent", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/shobcoder/shob/tree/main/skills/deep-research-agentType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add shobcoder/shob --skill deep-research-agent -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install shobcoder/shob deep-research-agent --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/shobcoder/shob.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/deep-research-agent .agents/skills/deep-research-agent && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "deep-research-agent" agent skill from https://github.com/shobcoder/shob/tree/main/skills/deep-research-agent into .agents/skills/deep-research-agent/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research-agent", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add shobcoder/shob --skill deep-research-agent -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install shobcoder/shob deep-research-agent --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/shobcoder/shob.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/deep-research-agent .cursor/skills/deep-research-agent && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "deep-research-agent" agent skill from https://github.com/shobcoder/shob/tree/main/skills/deep-research-agent into .cursor/skills/deep-research-agent/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research-agent", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/shobcoder/shob.git --path skills/deep-research-agent--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add shobcoder/shob --skill deep-research-agent -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install shobcoder/shob deep-research-agent --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/shobcoder/shob.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/deep-research-agent .gemini/skills/deep-research-agent && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "deep-research-agent" agent skill from https://github.com/shobcoder/shob/tree/main/skills/deep-research-agent into .gemini/skills/deep-research-agent/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research-agent", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install shobcoder/shob deep-research-agentInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add shobcoder/shob --skill deep-research-agent -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/shobcoder/shob.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/deep-research-agent .github/skills/deep-research-agent && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "deep-research-agent" agent skill from https://github.com/shobcoder/shob/tree/main/skills/deep-research-agent into .github/skills/deep-research-agent/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research-agent", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add shobcoder/shob --skill deep-research-agent -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install shobcoder/shob deep-research-agent --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/shobcoder/shob.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/deep-research-agent .opencode/skills/deep-research-agent && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "deep-research-agent" agent skill from https://github.com/shobcoder/shob/tree/main/skills/deep-research-agent into .opencode/skills/deep-research-agent/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "deep-research-agent", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
deep-research-agentComprehensive research agent for in-depth investigation. An agent skill from shobcoder/shob.
Deep Research Agent is an agent skill from shobcoder/shob. Comprehensive research agent for in-depth investigation. Use when users ask for deep research, comprehensive analysis, market research, academic surveys, competitive analysis, technology trends, or any topic requiring 100+ source verification. Triggers on requests like "investigate", "research", "analyze", "create a report", "comprehensive report", "deep dive", "thorough analysis".
Its SKILL.md is about 1.9k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science, covering Deep research. The repository describes itself as: Shob – an AI agent that delivers high-quality coding & automation work. The licence is MIT.
5 steps, taken from the step headings in SKILL.md.
Read from SKILL.md and the folder at commit 14831ba. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md (its code samples are json).
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Deep Research Agent loads about 1.9k tokens when it runs. Until then it costs about 101 tokens; SKILL.md has 664 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from shobcoder/shob at commit 14831ba, republished under its MIT licence (© shobcoder). 664 words, ~1,866 tokens.
.claude/skills/deep-research-agent/SKILL.md (or your agent's skills folder).Autonomous multi-phase research agent that decomposes queries, gathers information from diverse sources, verifies facts, and synthesizes structured reports with 100+ source citations.
Input: User's research query (natural language)
Process:
Analyze the query intent
Generate multi-dimensional search queries
Build investigation roadmap
Output: research_plan object containing:
{
"primary_topic": "string",
"sub_topics": ["string"],
"search_queries": [{"query": "string", "domain": "string", "priority": 1}],
"target_sources": 100,
"timeline_phases": ["phase1", "phase2", "phase3"]
}Tools Used: batch_web_search, extract_content_from_websites
Process:
Initial breadth search
Source classification
Iterative deep-diving
Diverse source coverage
Target: Minimum 100 unique, verified sources
Tools Used: extract_content_from_websites, extract_pdfs_key_info
Process:
Content extraction
Relevance assessment
Information extraction matrix
For each source:
- Source metadata (title, author, date, URL)
- Key findings (bullet points)
- Supporting evidence (quotes, statistics)
- Contradicting information (if any)
- Confidence level (high/medium/low)Pattern recognition
Process:
Cross-verification protocol
Contradiction resolution
Gap identification
Iteration loop (if gaps identified)
Output Format: Comprehensive research report
Structure:
# [Research Title]
## Executive Summary
[2-3 paragraph overview of key findings]
## 1. Background and Purpose
[Context and research motivation]
## 2. Key Findings
### 2.1 [Topic Area 1]
#### Facts and Data
#### Analysis and Interpretation
#### Sources
### 2.2 [Topic Area 2]
... (repeat for all sub-topics)
## 3. Market Trends and Future Outlook
[Aggregated trends and predictions]
## 4. Challenges and Risks
[Identified challenges with evidence]
## 5. Opportunities and Recommendations
[Actionable insights]
## 6. List of Sources
[All 100+ sources in academic citation format]
## Appendix
[Supplementary data, tables, charts]Quality Standards:
[1] Title, Publisher/Site, Publication Date, URLMaintain research log with:
This skill excels at:
© shobcoder, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Just SKILL.md in skills/deep-research-agent of shobcoder/shob.
Open the folder on GitHubat commit 14831ba
Deep Research Agent next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Deep Research Agent this skillshobcoder/shob | 577 | — | ~1.9k | Automated safety check: Pass | MIT | |
| GitHub Deep Researchbytedance/deer-flow | 83k | 5 repos | ~1.3k | Automated safety check: Pass | MIT | |
| Deep Research WorkflowTokenRhythm/opensquilla | 7.1k | — | ~1.3k | Automated safety check: Pass | Apache-2.0 | |
| X Researchrohunvora/x-research-skill | 1.2k | 1 repos | ~1.6k | Automated safety check: Pass | None | |
| Deep Researchsanjay3290/ai-skills | 430 | 10 repos | ~683 | Automated safety check: Notes | Apache-2.0 | |
| ResearchWeizhena/Deep-Research-skills | 2.3k | 3 repos | ~1.1k | Automated safety check: Pass | MIT |
bytedance/deer-flow
Researches a GitHub repository over four rounds using the GitHub API and web search, then writes a structured markdown report with timeline, metrics and Mermaid diagrams.
TokenRhythm/opensquilla
Runs multi-round research in three stages with a persisted state file, evidence tracking and a long-form report with per-claim citations.
rohunvora/x-research-skill
General-purpose X/Twitter research agent. An agent skill from rohunvora/x-research-skill.
sanjay3290/ai-skills
Execute autonomous multi-step research using Google Gemini Deep Research Agent.
Weizhena/Deep-Research-skills
Conduct preliminary research on a topic and generate research outline.
KKKKhazix/khazix-skills
Runs a two-axis deep research method on a product, company, concept or person: its full history over time, compared with peers today, delivered as a typeset PDF report.
shobcoder/shob
GOD MODE deep research skill. An agent skill from shobcoder/shob.
shobcoder/shob
Work with Effect v4 / effect-smol TypeScript code in this repo
shobcoder/shob
Persistent, token-efficient project memory. An agent skill from shobcoder/shob.
shobcoder/shob
UI/UX design intelligence expert for web and mobile applications.
shobcoder/shob
Scrape, crawl, and extract data from websites. An agent skill from shobcoder/shob.
Categories
Comprehensive research agent for in-depth investigation. An agent skill from shobcoder/shob. Deep Research Agent is an agent skill from shobcoder/shob. Comprehensive research agent for in-depth investigation.
Deep Research Agent fits situations like: users ask for deep research; comprehensive analysis; market research; academic surveys.
Run `npx skills add shobcoder/shob --skill deep-research-agent -a claude-code`. Or copy the skill folder (skills/deep-research-agent in shobcoder/shob) into .claude/skills/deep-research-agent in your project. Claude Code loads it when a task matches its description.
Run `npx skills add shobcoder/shob --skill deep-research-agent -a codex`. Or copy the skill folder (skills/deep-research-agent in shobcoder/shob) into .agents/skills/deep-research-agent in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add shobcoder/shob --skill deep-research-agent -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/deep-research-agent, .gemini/skills/deep-research-agent, .github/skills/deep-research-agent and .opencode/skills/deep-research-agent in your project.
SKILL.md names no scripts, command-line tools or credentials: Deep Research Agent is instructions for the agent only.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Deep Research Agent is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 1.9k tokens (SKILL.md is roughly 7.5k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Deep Research Agent: GitHub Deep Research (bytedance/deer-flow, 83k stars), Deep Research Workflow (TokenRhythm/opensquilla, 7.1k stars), X Research (rohunvora/x-research-skill, 1.2k stars) and Deep Research (sanjay3290/ai-skills, 430 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
shobcoder (a GitHub organization) maintains it in shobcoder/shob, which has 577 GitHub stars. The repository holds 6 skills in this directory. The repository was last updated on September 18, 2026.
Source: shobcoder/shob on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.