End-to-end R data analysis workflow from exploration through regression to publication-ready tables and figures

No licenceAuto-check: notesData & Analytics

Install Data Analysis

skills CLI
$ npx skills add maxwell2732/paper-replicate-agent-demo --skill data-analysis -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install maxwell2732/paper-replicate-agent-demo data-analysis --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/maxwell2732/paper-replicate-agent-demo.git skills-src && mkdir -p .claude/skills && cp -r skills-src/.claude/skills/data-analysis .claude/skills/data-analysis && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
data-analysis
GitHub stars
136
Used in
2 other repos
Token cost
~1.1k tokens
SKILL.md length
407 words
Files
1
Skills in repo
9
Repo updated
First seen
Licence
None found

At a glance

End-to-end R data analysis workflow from exploration through regression to publication-ready tables and figures

  • Works in 5 steps: Setup and Data Loading → Exploratory Data Analysis → Main Analysis → …
  • Tasks that involve Data analysis
  • SKILL.md covers Constraints, Workflow Phases, Script Structure and Important
  • Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md

What it does

Data Analysis is an agent skill from maxwell2732/paper-replicate-agent-demo. End-to-end R data analysis workflow from exploration through regression to publication-ready tables and figures

Its SKILL.md is about 1.1k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

It sits in Data & Analytics, covering Data analysis. The repository describes itself as: A structured Claude Code workflow for empirically replicating published research using UK Biobank (UKB) data, created by Chen Zhu 朱晨 | 遗传社科研究.

When your agent uses it

  • Tasks that involve Data analysis

Example prompts

  • “/data-analysis”

Requirements

  • Pre-approved tools (allowed-tools): Read, Grep, Glob, Write, Edit, Bash, Task

Workflow steps

5 steps, taken from the step headings in SKILL.md.

  1. Setup and Data Loading
  2. Exploratory Data Analysis
  3. Main Analysis
  4. Publication-Ready Output
  5. Save and Review

What it can do on your machine

Read from SKILL.md and the folder at commit 83399e0. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves these tools, so the agent can use them without asking each time:

    • Read
    • Grep
    • Glob
    • Write
    • Edit
    • Bash
    • Task

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    No scripts in the folder and no shell commands in SKILL.md (its code samples are r).

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Data Analysis loads about 1.1k tokens when it runs. Until then it costs about 31 tokens; SKILL.md has 407 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~31
When it runs · the whole SKILL.md, loaded when a task matches
~1.1k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check: notes

The automated check noted patterns worth knowing about, such as sudo or a known installer.

  • NotePre-approves every shell command (allowed-tools: Bash)SKILL.md
    allowed-tools: Read, Grep, Glob, Write, Edit, Bash, Task

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

Without a licence we can't republish the file, so here is its outline and opening line. It has 407 words (~1,099 tokens).

“Run an end-to-end data analysis in R: load, explore, analyze, and produce publication-ready output.”

— opening of SKILL.md by maxwell2732
name
data-analysis
allowed-tools
Read, Grep, Glob, Write, Edit, Bash, Task
disable-model-invocation
true
argument-hint
[dataset path or description of analysis goal]

Read the full SKILL.md on GitHub

Files

Just SKILL.md in .claude/skills/data-analysis of maxwell2732/paper-replicate-agent-demo.

Open the folder on GitHubat commit 83399e0

Used in 2 other repositories

We found 3 copies of this SKILL.md (exact, near-identical or edited) in other folders, from 2 other GitHub owners. This page covers the copy in maxwell2732/paper-replicate-agent-demo, which our catalogue first saw on October 7, 2026.

Compare with similar skills

Data Analysis next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Data Analysis compared with similar skills
SkillStarsUsed inTokensAuto-checkLicenceRepo updated
Data Analysis this skillmaxwell2732/paper-replicate-agent-demo1362 repos~1.1kAutomated safety check: NotesNone
Exploratory Data Analysisspacering-net/codeg3.8k15 repos~3.6kAutomated safety check: PassMIT
Excel and CSV Data Analysisbytedance/deer-flow83k4 repos~2.2kAutomated safety check: PassMIT
Exploratory Data AnalysisOleafly/Oleafly2052 repos~3.4kAutomated safety check: NotesMIT
Python Executorcortega26/chile-hub1132 repos~1.5kAutomated safety check: PassMIT
Agentic Kaggle WorkflowFrankS-IntelLab/agentic-kaggle-skill188—~4kAutomated safety check: PassMIT

Similar skills

  • Exploratory Data Analysis

    spacering-net/codeg

    Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats.

    3.8k GitHub starsUsed in 15 repos~3.6k tokens
    Data & AnalyticsAuto-check passed
  • Excel and CSV Data Analysis

    bytedance/deer-flow

    Analyzes uploaded Excel and CSV files with SQL through DuckDB, producing schema inspections, statistical summaries and exports to CSV, JSON or Markdown.

    83k GitHub starsUsed in 4 repos~2.2k tokens
    Data & AnalyticsAuto-check passed
  • Perform bounded, local exploratory analysis of explicitly supported scientific files.

    205 GitHub starsUsed in 2 repos~3.4k tokens
    Data & AnalyticsAuto-check: notes
  • Python Executor

    cortega26/chile-hub

    Execute Python code in a safe sandboxed environment via [inference.sh](https://inference.sh).

    113 GitHub starsUsed in 2 repos~1.5k tokens
    Data & AnalyticsAuto-check passed
  • Agentic Kaggle Workflow

    FrankS-IntelLab/agentic-kaggle-skill

    Takes a Kaggle competition from rules and validation design through baselines, ensembling and notebook architecture to a scored submission.

    188 GitHub stars~4k tokensUpdated 3 mo ago
    Data & AnalyticsAuto-check passed
  • Yichen Wecom Local Vault

    mcncarl/yichen-skills

    Read, decrypt, query, search, and export local WeCom/企业微信 5.x desktop databases on macOS into a private read-only vault.

    4.3k GitHub stars~1.3k tokensUpdated 3 days ago
    Data & AnalyticsAuto-check passed

More from maxwell2732/paper-replicate-agent-demo

All 9 skills in this repo
  • Lit Review

    maxwell2732/paper-replicate-agent-demo

    Structured literature search and synthesis with citation extraction and gap identification

    136 GitHub starsUsed in 3 repos~728 tokens
    Auto-check passed
  • Commit

    maxwell2732/paper-replicate-agent-demo

    Stage, commit, create PR, and merge to main. An agent skill from maxwell2732/paper-replicate-agent-demo.

    136 GitHub starsUsed in 1 repo~422 tokens
    Auto-check: notes
  • Review Paper

    maxwell2732/paper-replicate-agent-demo

    Comprehensive manuscript review covering argument structure, econometric specification, citation completeness, and potential referee objections

    136 GitHub starsUsed in 3 repos~1.1k tokens
    Auto-check passed
  • Interview Me

    maxwell2732/paper-replicate-agent-demo

    Interactive interview to formalize a research idea into a structured specification with hypotheses and empirical strategy

    136 GitHub starsUsed in 2 repos~921 tokens
    Auto-check passed
  • Research Ideation

    maxwell2732/paper-replicate-agent-demo

    Generate structured research questions, testable hypotheses, and empirical strategies from a topic or dataset

    136 GitHub starsUsed in 2 repos~914 tokens
    Auto-check passed
  • Deploy

    maxwell2732/paper-replicate-agent-demo

    Render Quarto slides and sync to docs/ for GitHub Pages deployment.

    136 GitHub starsUsed in 1 repo~371 tokens
    Auto-check: notes

Questions about Data Analysis

What does Data Analysis do?

End-to-end R data analysis workflow from exploration through regression to publication-ready tables and figures. Data Analysis is an agent skill from maxwell2732/paper-replicate-agent-demo.

When should I use Data Analysis?

Data Analysis fits situations like: tasks that involve Data analysis.

How do I install Data Analysis in Claude Code?

Run `npx skills add maxwell2732/paper-replicate-agent-demo --skill data-analysis -a claude-code`. Or copy the skill folder (.claude/skills/data-analysis in maxwell2732/paper-replicate-agent-demo) into .claude/skills/data-analysis in your project. Claude Code loads it when a task matches its description.

How do I install Data Analysis in Codex?

Run `npx skills add maxwell2732/paper-replicate-agent-demo --skill data-analysis -a codex`. Or copy the skill folder (.claude/skills/data-analysis in maxwell2732/paper-replicate-agent-demo) into .agents/skills/data-analysis in your project. Codex loads it when a task matches its description.

Can I use Data Analysis in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add maxwell2732/paper-replicate-agent-demo --skill data-analysis -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/data-analysis, .gemini/skills/data-analysis, .github/skills/data-analysis and .opencode/skills/data-analysis in your project.

What does Data Analysis need to run?

SKILL.md names no scripts, command-line tools or credentials: Data Analysis is instructions for the agent only. Its frontmatter pre-approves these tools: Read, Grep, Glob, Write, Edit, Bash, Task.

Does Data Analysis access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Data Analysis safe to install?

Our automated static check of SKILL.md found notes only (pre-approves every shell command (allowed-tools: bash)), nothing it rates as a warning. It is not a guarantee. Review the folder before installing.

What licence does Data Analysis use?

No licence was found for Data Analysis or its repository. Without one, default copyright applies: ask the author before reusing or redistributing it.

How many tokens does Data Analysis use?

About 1.1k tokens (SKILL.md is roughly 4.4k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Data Analysis?

Skills that share tags, products or a category with Data Analysis: Exploratory Data Analysis (spacering-net/codeg, 3.8k stars), Excel and CSV Data Analysis (bytedance/deer-flow, 83k stars), Exploratory Data Analysis (Oleafly/Oleafly, 205 stars) and Python Executor (cortega26/chile-hub, 113 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Data Analysis?

maxwell2732 (a GitHub user) maintains it in maxwell2732/paper-replicate-agent-demo, which has 136 GitHub stars. The repository holds 9 skills in this directory. The repository was last updated on May 22, 2026.

Source: maxwell2732/paper-replicate-agent-demo on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.