Executing Plans Inline
obra/superpowers
Has the agent carry out an implementation plan itself, task by task in the current session, keeping a ledger, proving each step with a test and ending with one whole-branch review.
Creates implementation plan, writes project code with judge feedback loop, and submits final experiment run.
$ npx skills add LigphiDonk/Oh-my--paper --skill inno-experiment-dev -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install LigphiDonk/Oh-my--paper inno-experiment-dev --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/LigphiDonk/Oh-my--paper.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/inno-experiment-dev .claude/skills/inno-experiment-dev && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "inno-experiment-dev" agent skill from https://github.com/LigphiDonk/Oh-my--paper/tree/main/skills/inno-experiment-dev into .claude/skills/inno-experiment-dev/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "inno-experiment-dev", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/LigphiDonk/Oh-my--paper/tree/main/skills/inno-experiment-devType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add LigphiDonk/Oh-my--paper --skill inno-experiment-dev -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install LigphiDonk/Oh-my--paper inno-experiment-dev --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/LigphiDonk/Oh-my--paper.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/inno-experiment-dev .agents/skills/inno-experiment-dev && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "inno-experiment-dev" agent skill from https://github.com/LigphiDonk/Oh-my--paper/tree/main/skills/inno-experiment-dev into .agents/skills/inno-experiment-dev/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "inno-experiment-dev", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add LigphiDonk/Oh-my--paper --skill inno-experiment-dev -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install LigphiDonk/Oh-my--paper inno-experiment-dev --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/LigphiDonk/Oh-my--paper.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/inno-experiment-dev .cursor/skills/inno-experiment-dev && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "inno-experiment-dev" agent skill from https://github.com/LigphiDonk/Oh-my--paper/tree/main/skills/inno-experiment-dev into .cursor/skills/inno-experiment-dev/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "inno-experiment-dev", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/LigphiDonk/Oh-my--paper.git --path skills/inno-experiment-dev--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add LigphiDonk/Oh-my--paper --skill inno-experiment-dev -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install LigphiDonk/Oh-my--paper inno-experiment-dev --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/LigphiDonk/Oh-my--paper.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/inno-experiment-dev .gemini/skills/inno-experiment-dev && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "inno-experiment-dev" agent skill from https://github.com/LigphiDonk/Oh-my--paper/tree/main/skills/inno-experiment-dev into .gemini/skills/inno-experiment-dev/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "inno-experiment-dev", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install LigphiDonk/Oh-my--paper inno-experiment-devInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add LigphiDonk/Oh-my--paper --skill inno-experiment-dev -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/LigphiDonk/Oh-my--paper.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/inno-experiment-dev .github/skills/inno-experiment-dev && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "inno-experiment-dev" agent skill from https://github.com/LigphiDonk/Oh-my--paper/tree/main/skills/inno-experiment-dev into .github/skills/inno-experiment-dev/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "inno-experiment-dev", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add LigphiDonk/Oh-my--paper --skill inno-experiment-dev -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install LigphiDonk/Oh-my--paper inno-experiment-dev --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/LigphiDonk/Oh-my--paper.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/inno-experiment-dev .opencode/skills/inno-experiment-dev && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "inno-experiment-dev" agent skill from https://github.com/LigphiDonk/Oh-my--paper/tree/main/skills/inno-experiment-dev into .opencode/skills/inno-experiment-dev/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "inno-experiment-dev", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
inno-experiment-devCreates implementation plan, writes project code with judge feedback loop, and submits final experiment run.
Inno Experiment Dev is an agent skill from LigphiDonk/Oh-my--paper. Creates implementation plan, writes project code with judge feedback loop, and submits final experiment run.
Its SKILL.md is about 2.8k tokens, which your agent loads only when the skill is triggered. The skill folder holds 11 other files, including reference files (for example `prompts/build_iteration_query.md`, `prompts/build_judge_query.md` and `prompts/build_judge_simple_query.md`).
It sits in Agent Workflows, covering Planning. The repository describes itself as: A Claude Code plugin that turns your terminal into an autonomous research lab — literature survey, experiment execution, paper writing, all in one pipeline. The licence is MIT.
3 steps, taken from the step headings in SKILL.md.
Read from SKILL.md and the folder at commit 6baece9. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Shell commands in SKILL.md call:
pythonFrom the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Inno Experiment Dev loads about 2.8k tokens when it runs, and up to ~4.8k if it reads all its reference files. Until then it costs about 32 tokens; SKILL.md has 945 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from LigphiDonk/Oh-my--paper at commit 6baece9, republished under its MIT licence (© LigphiDonk). 945 words, ~2,767 tokens.
.claude/skills/inno-experiment-dev/SKILL.md (or your agent's skills folder). This skill also uses 9 other files; get the full folder from GitHub.Creates implementation plan, writes project code with judge feedback loop, and submits final experiment run. Use after code-survey in both Idea and Plan branches.
Use this skill when the user request matches its research workflow scope. Prefer the bundled resources instead of recreating templates or reference material. Keep outputs traceable to project files, citations, scripts, or upstream evidence.
references/ only when the current task needs the extra detail.Merges the former inno-implementation-plan, inno-ml-dev-iteration, and the submit step of inno-experiment-submit-refine. Mirrors _create_implementation_plan (830-858), _implement_and_iterate (861-920), and the submit portion of _submit_and_refine_experiments (922-945) in run_infer_idea_ours.py.
| Variable | Source | Description |
|---|---|---|
survey_res | inno-idea-generation or user | The finalized selected idea (or refined_for_downstream) |
references | pipeline config | Pre-formatted string of source papers |
updated_prepare_res | inno-prepare-resources | JSON with reference_codebases and reference_paths |
code_survey_res | inno-code-survey | Comprehensive implementation report / model survey notes |
dataset_description | from prepare step / context | Description of available datasets (not in instance.json) |
core_code | instance.json Experiment.core_code | Absolute path when created by Dr. Claw (e.g. <project_path>/Experiment/core_code); use as-is or resolve with path.join(project_path, value) if relative |
code_references | instance.json Experiment.code_references | Absolute path when created by Dr. Claw (e.g. <project_path>/Experiment/code_references); use as-is or resolve if relative |
max_iter_times | pipeline config | Max judge-iteration rounds (default 2) |
context_variables | shared state | Mutable dict carrying state across agents |
Plan mode additionally uses ideas and survey-specific prompt variants (build_plan_query_with_survey, build_iteration_query_for_plan, etc.).
| Variable | Description |
|---|---|
plan_res | Detailed implementation plan with dataset, model, training, and testing sections |
ml_dev_res | Final ML Agent implementation result |
judge_res | Final Judge Agent feedback |
judge_messages | Full conversation thread (preserved for inno-experiment-analysis) |
submit_res | Experiment submission result with statistical outputs |
context_variables | Updated with dataset_plan, training_plan, testing_plan, suggestion_dict, raw_error_stats |
| File | Agent | Content |
|---|---|---|
Experiment/core_code/logs/coding_plan_agent.json | Coding Plan Agent | context_variables + messages from planning phase |
Experiment/core_code/logs/machine_learning_agent.json | ML Agent | Initial implementation messages (+ _iter_{N}.json for judge iterations) |
Experiment/core_code/logs/judge_agent.json | Judge Agent | Evaluation messages (+ _iter_{N}.json for iterations) |
Experiment/core_code/logs/machine_learning_agent_iter_submit.json | ML Agent | Submission run messages and results |
Mirrors _create_implementation_plan.
Optional pre-step (Idea mode only): If refining the idea for implementation clarity, call the idea refinement agent to produce refined_for_downstream with tensor interfaces and forward-pass sketch.
Build plan query:
plan_query = build_plan_query(survey_res, references, updated_prepare_res, code_survey_res, dataset_description) (see prompts/build_plan_query.md)build_plan_query_with_survey(ideas, references, prepare_res, code_survey_res, dataset_description)Call Coding Plan Agent with messages = [{"role": "user", "content": plan_query}].
tree / cat, then creates structured plans via plan_dataset, plan_training, plan_testing.case_resolved to merge plans.plan_res = plan_messages[-1]["content"].references/coding_plan_agent.md for agent details.Verify the plan has clear sections: dataset, model, training, evaluation, file layout.
Mirrors _implement_and_iterate.
Initial implementation: Build ml_dev_query = build_ml_dev_query(survey_res, prepare_res, code_survey_res, plan_res, dataset_description, core_code, code_references) (see prompts/build_ml_dev_query.md). Use paths from instance.json: Experiment.core_code, Experiment.code_references (absolute in Dr. Claw–created projects; use as-is or resolve with project path if relative). Call ML Agent with messages = [{"role": "user", "content": ml_dev_query}]. Set ml_dev_res = ml_messages[-1]["content"].
references/ml_agent_instructions.md for agent details.Initial judge evaluation: Build judge_query = build_judge_query(survey_res, prepare_res, plan_res, ml_dev_res) (see prompts/build_judge_query.md). Call Judge Agent with input_messages = [{"role": "user", "content": judge_query}]. Set judge_res = judge_messages[-1]["content"].
references/judge_agent_instructions.md for agent details.Iteration loop (for i in 0..max_iter_times - 1):
a. Build iteration_query = build_iteration_query(survey_res, prepare_res, code_survey_res, plan_res, ml_dev_res, judge_res, core_code, code_references) (see prompts/build_iteration_query.md). Use paths from instance.json (absolute in Dr. Claw–created projects; use as-is or resolve if relative). Plan mode uses build_iteration_query_for_plan.
b. Append as user message to judge_messages. Call ML Agent with iter_times=i+1. Update ml_dev_res.
c. Build judge_simple_query = build_judge_simple_query(survey_res, prepare_res, plan_res, ml_dev_res) (see prompts/build_judge_simple_query.md). Plan mode uses build_judge_simple_query_for_plan.
d. Append as user message to judge_messages. Call Judge Agent with iter_times=i+1. Update judge_res.
e. If "fully_correct": true in last message, break early.
Preserve judge_messages for the submit step and for downstream inno-experiment-analysis.
Mirrors the submit portion of _submit_and_refine_experiments.
Build submit query: submit_query = build_submit_query(survey_res, ml_dev_res, judge_res, core_code) (see prompts/build_submit_query.md). Resolve core_code from instance.Experiment.core_code. Plan mode uses build_submit_query_for_plan.
Append to judge_messages as user message. Call ML Agent with iter_times="submit".
run_training_testing.py, ensures checkpoints are saved.submit_res = judge_messages[-1]["content"].If the implementation is not runnable, ML Agent calls case_not_resolved. Otherwise, case_resolved with statistical results and analysis.
All custom Python tools map to Claude Code built-in capabilities:
| Original Tool | Claude Code Equivalent |
|---|---|
execute_command | Shell tool (direct execution) |
run_python | python <script> via Shell tool |
create_file / write_file | Write tool |
read_file | Read tool or cat <path> |
create_directory | mkdir -p <path> |
list_files | ls <path> |
gen_code_tree_structure | tree -L 3 <path> |
diagnose_code_error | Analyze stderr output + inspect code |
rollback_and_reimplement | Re-write file with different approach |
view_error_history | Track error fingerprints in agent memory |
plan_dataset / plan_training / plan_testing | Structure plan sections in agent response |
case_resolved / case_not_resolved | Agent returns result / failure reason |
build_plan_query variant used for Idea vs Plan mode.plan_res has clear dataset/model/training/testing sections.ml_dev_res recorded.judge_res recorded.fully_correct.judge_messages preserved across all phases.judge_messages; ML Agent submission run completed.Experiment/core_code/checkpoints/model_final.pth.Experiment/core_code/logs/: coding_plan_agent.json, machine_learning_agent.json, judge_agent.json, machine_learning_agent_iter_submit.json.run_infer_idea_ours.py: _create_implementation_plan (830-858), _implement_and_iterate (861-920), _submit_and_refine_experiments submit step (922-945)prompt_templates.py: build_plan_query (203-233), build_ml_dev_query (236-381), build_judge_query (384-417), build_iteration_query (420-468), build_judge_simple_query (471-494), build_submit_query (497-527)plan_agent.py, ml_agent.py, judge_agent.py in inno/agents/inno_agent/© LigphiDonk, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
SKILL.md and 9 other files (references) in skills/inno-experiment-dev of LigphiDonk/Oh-my--paper.
Open the folder on GitHubat commit 6baece9
Inno Experiment Dev next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Inno Experiment Dev this skillLigphiDonk/Oh-my--paper | 738 | — | ~2.8k | Automated safety check: Pass | MIT | |
| Executing Plans Inlineobra/superpowers | 296k | 2 repos | ~5.1k | Automated safety check: Pass | MIT | |
| Interview Meaddyosmani/agent-skills | 103k | 6 repos | ~3.8k | Automated safety check: Pass | MIT | |
| OpenSpec Guided OnboardingFission-AI/OpenSpec | 71k | 1 repos | ~4.5k | Automated safety check: Pass | MIT | |
| Writing Plansgeeksblabla/stateofdev.ma | 163 | 57 repos | ~661 | Automated safety check: Pass | None | |
| Subagent Driven DevelopmentAsvarox/allkaraoke | 261 | 38 repos | ~1.2k | Automated safety check: Pass | None |
obra/superpowers
Has the agent carry out an implementation plan itself, task by task in the current session, keeping a ledger, proving each step with a test and ending with one whole-branch review.
addyosmani/agent-skills
Asks one question at a time, each with a best guess attached, until the agent is about 95 percent sure what you really want, before any plan, spec or code.
Fission-AI/OpenSpec
Walks you through a complete OpenSpec workflow cycle with narration while doing real work in your codebase.
geeksblabla/stateofdev.ma
A skill your agent uses when design is complete and you need detailed implementation tasks for engineers with zero codebase context - creates comprehensive implementation plans with exact file…
Asvarox/allkaraoke
A skill your agent uses when executing implementation plans with independent tasks in the current session
jd-opensource/JoySafeter
Implements Manus-style file-based planning for complex tasks.
LigphiDonk/Oh-my--paper
Searches bioRxiv life sciences preprints by keyword, author, date range or category with a Python script, returning JSON metadata and optional PDF downloads.
LigphiDonk/Oh-my--paper
Searches and downloads legally accessible academic PDFs, OCRs them to Markdown, and organizes the results into a traceable, AI-readable literature library.
LigphiDonk/Oh-my--paper
Finds and clones missing code repositories for a chosen research idea, then writes a survey that maps academic concepts to their implementations.
LigphiDonk/Oh-my--paper
Turns experimental data such as CSV, JSON or TensorBoard logs into statistical significance tests, visualizations and a drafted Results section.
LigphiDonk/Oh-my--paper
Lays out principles for catching fake, mismatched, or inconsistently formatted citations in academic writing, checked through live web search.
LigphiDonk/Oh-my--paper
Runs a seven-step quality-control and exploration pipeline on scRNA-seq, CyTOF or flow cytometry data and writes a plain-language report of what it found.
Categories
Creates implementation plan, writes project code with judge feedback loop, and submits final experiment run. Inno Experiment Dev is an agent skill from LigphiDonk/Oh-my--paper. Creates implementation plan, writes project code with judge feedback loop, and submits final experiment run.
Inno Experiment Dev fits situations like: tasks that involve Planning.
Run `npx skills add LigphiDonk/Oh-my--paper --skill inno-experiment-dev -a claude-code`. Or copy the skill folder (skills/inno-experiment-dev in LigphiDonk/Oh-my--paper) into .claude/skills/inno-experiment-dev in your project. Claude Code loads it when a task matches its description.
Run `npx skills add LigphiDonk/Oh-my--paper --skill inno-experiment-dev -a codex`. Or copy the skill folder (skills/inno-experiment-dev in LigphiDonk/Oh-my--paper) into .agents/skills/inno-experiment-dev in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add LigphiDonk/Oh-my--paper --skill inno-experiment-dev -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/inno-experiment-dev, .gemini/skills/inno-experiment-dev, .github/skills/inno-experiment-dev and .opencode/skills/inno-experiment-dev in your project.
Going by SKILL.md and its folder, Inno Experiment Dev needs the command-line tools its instructions call (python). Our summary lists: Python 3.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Inno Experiment Dev is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 2.8k tokens (SKILL.md is roughly 11k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 2.1k tokens, read only when the agent opens those files.
Skills that share tags, products or a category with Inno Experiment Dev: Executing Plans Inline (obra/superpowers, 296k stars), Interview Me (addyosmani/agent-skills, 103k stars), OpenSpec Guided Onboarding (Fission-AI/OpenSpec, 71k stars) and Writing Plans (geeksblabla/stateofdev.ma, 163 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
LigphiDonk (a GitHub user) maintains it in LigphiDonk/Oh-my--paper, which has 738 GitHub stars. The repository holds 27 skills in this directory. The repository was last updated on April 15, 2026.
Source: LigphiDonk/Oh-my--paper on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.