Scientific Schematics
jimmc414/Kosmos
Create publication-quality scientific diagrams, flowcharts, and schematics using Python (graphviz, matplotlib, schemdraw, networkx).
Create, revise, or audit academic data/result figures for CS/AI/ML papers.
$ npx skills add joshua-zyy/academic-paper-writer --skill academic-figure -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install joshua-zyy/academic-paper-writer academic-figure --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/joshua-zyy/academic-paper-writer.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/academic-figure .claude/skills/academic-figure && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "academic-figure" agent skill from https://github.com/joshua-zyy/academic-paper-writer/tree/main/skills/academic-figure into .claude/skills/academic-figure/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-figure", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/joshua-zyy/academic-paper-writer/tree/main/skills/academic-figureType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add joshua-zyy/academic-paper-writer --skill academic-figure -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install joshua-zyy/academic-paper-writer academic-figure --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/joshua-zyy/academic-paper-writer.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/academic-figure .agents/skills/academic-figure && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "academic-figure" agent skill from https://github.com/joshua-zyy/academic-paper-writer/tree/main/skills/academic-figure into .agents/skills/academic-figure/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-figure", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add joshua-zyy/academic-paper-writer --skill academic-figure -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install joshua-zyy/academic-paper-writer academic-figure --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/joshua-zyy/academic-paper-writer.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/academic-figure .cursor/skills/academic-figure && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "academic-figure" agent skill from https://github.com/joshua-zyy/academic-paper-writer/tree/main/skills/academic-figure into .cursor/skills/academic-figure/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-figure", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/joshua-zyy/academic-paper-writer.git --path skills/academic-figure--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add joshua-zyy/academic-paper-writer --skill academic-figure -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install joshua-zyy/academic-paper-writer academic-figure --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/joshua-zyy/academic-paper-writer.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/academic-figure .gemini/skills/academic-figure && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "academic-figure" agent skill from https://github.com/joshua-zyy/academic-paper-writer/tree/main/skills/academic-figure into .gemini/skills/academic-figure/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-figure", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install joshua-zyy/academic-paper-writer academic-figureInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add joshua-zyy/academic-paper-writer --skill academic-figure -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/joshua-zyy/academic-paper-writer.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/academic-figure .github/skills/academic-figure && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "academic-figure" agent skill from https://github.com/joshua-zyy/academic-paper-writer/tree/main/skills/academic-figure into .github/skills/academic-figure/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-figure", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add joshua-zyy/academic-paper-writer --skill academic-figure -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install joshua-zyy/academic-paper-writer academic-figure --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/joshua-zyy/academic-paper-writer.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/academic-figure .opencode/skills/academic-figure && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "academic-figure" agent skill from https://github.com/joshua-zyy/academic-paper-writer/tree/main/skills/academic-figure into .opencode/skills/academic-figure/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "academic-figure", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
academic-figureCreate, revise, or audit academic data/result figures for CS/AI/ML papers.
Academic Figure is an agent skill from joshua-zyy/academic-paper-writer. Create, revise, or audit academic data/result figures for CS/AI/ML papers. Data/result plots default to Python-generated editable SVG with CS/AI/ML-specific design rules for benchmarks, ablations, training dynamics, robustness, diagnostics, distributions, confusion matrices, and efficiency tradeoffs. Use when: generating plots from experiment results or numeric data, auditing publication figures, suggesting data-driven figure types, revising chart colors/layouts/labels, or preparing figure QA reports. Model…
Its SKILL.md is about 820 tokens, which your agent loads only when the skill is triggered. The skill folder holds 21 other files, including scripts and reference files (for example `agents/figure_agent.md`, `manifest.yaml` and `references/api.md`).
It sits in Data & Analytics, covering Data visualization, Diagrams and Scientific writing. It works with Python. The repository describes itself as: 面向 CS / AI / ML 领域的证据驱动、分节推进的论文写作 Agent Skill。 The licence is MIT.
6 steps, taken from the first numbered list in SKILL.md.
Read from SKILL.md and the folder at commit 6fceefd. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Ships 2 files in scripts/ (Python, from the files we listed), which the agent can run.
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Academic Figure loads about 816 tokens when it runs, and up to ~11k if it reads all its reference files. Until then it costs about 239 tokens; SKILL.md has 274 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); the scripts in this folder are not scanned.
The full file from joshua-zyy/academic-paper-writer at commit 6fceefd, republished under its MIT licence (© joshua-zyy). 274 words, ~816 tokens.
.claude/skills/academic-figure/SKILL.md (or your agent's skills folder). This skill also uses 16 other files; get the full folder from GitHub.CS/AI/ML academic-figure router. 实验数据图默认交付 Python/matplotlib 可编辑 SVG,并执行 CS/AI/ML 图表设计 gate。模型框架图、架构图、overview 图和复杂机制图不属于本 skill 的自动绘制范围;如论文需要此类图,只能输出人工绘制需求、证据清单、caption 草案或 figure blueprint notes。
manifest.yaml. It declares always_load files, axes, and references.on_demand.always_load. These are the skill's binding rules — not reference material.stance.md defines Python-only plotting, figure contract, visual policy, and scope.red-lines.md defines absolute prohibitions. Do not negotiate these.output-contract.md defines deliverables per mode.anti-patterns.md defines known failure modes and their correct alternatives.mode from the manifest. If ambiguous, ask one concise clarification only when data source or target use is missing. Requests for model framework, architecture, overview, or mechanism diagrams use figure-blueprint only to produce manual_figure_needed notes; never render images, SVG, or prompts.references/ only when the manifest's references.on_demand condition is satisfied.| Mode | Use when |
|---|---|
chart-from-data | Data files or numeric results, needs publication plot with CS/AI/ML chart design gate |
figure-blueprint | Wants figure suggestions for a paper section |
figure-audit | Existing figure reviewed for publication readiness |
figure-revision | Existing figure needs revision |
agents/figure_agent.md is dispatched by the orchestrator at Step 6.4. The agent returns figure artifacts, scripts, SVG paths, and reports; it must not independently edit project source code or experimental data.
chart-from-data: Figure Contract, CS/AI/ML chart design gate, Python script, source data, editable SVG, QA report — all pass.figure-audit: Every QA item has pass/fail status and concrete remediation.figure-blueprint: Every suggested figure maps to a paper claim and data/evidence source.figure-revision: Revised artifact or instructions, QA report, unchanged evidence traceability.© joshua-zyy, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
SKILL.md and 16 other files (scripts, references) in skills/academic-figure of joshua-zyy/academic-paper-writer.
Open the folder on GitHubat commit 6fceefd
Academic Figure next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Academic Figure this skilljoshua-zyy/academic-paper-writer | 115 | — | ~816 | Automated safety check: Pass | MIT | |
| Scientific Schematicsjimmc414/Kosmos | 595 | — | ~16k | Automated safety check: Notes | None | |
| Microsim Generatordmccreary/ibook-skills | 105 | — | ~11k | Automated safety check: Pass | None | |
| Scientific Figure MakingChenLiu-1996/figures4papers | 8.3k | — | ~557 | Automated safety check: Pass | Custom licence | |
| Visualizebrycewang-stanford/Auto-Empirical-Research-Skills | 4.6k | — | ~1.4k | Automated safety check: Pass | Custom licence | |
| Bio Data Visualization Circos PlotsGPTomics/bioSkills | 1.2k | 2 repos | ~3.4k | Automated safety check: Pass | MIT |
jimmc414/Kosmos
Create publication-quality scientific diagrams, flowcharts, and schematics using Python (graphviz, matplotlib, schemdraw, networkx).
dmccreary/ibook-skills
Creates interactive educational MicroSims, routing to the best-matched generator - p5.js, Chart.js, Plotly, Mermaid, vis-network, timelines, maps, Venn, causal-loop/feedback-loop diagrams (CLD)…
ChenLiu-1996/figures4papers
Covers publication-ready matplotlib figures for academic papers, slides, and reports—bars, trends, scatter, heatmaps, and multi-panel layouts—with this…
brycewang-stanford/Auto-Empirical-Research-Skills
Create publication-quality figures that meet journal submission standards.
GPTomics/bioSkills
Build circular genome visualizations using circlize (R), pyCirclize (Python), or Circos (Perl CLI) with ideogram tracks, multi-data tracks (scatter, histogram, heatmap), chord/link arcs for…
GPTomics/bioSkills
Build Sankey, alluvial, river, and CONSORT-style flow diagrams to visualize cohort transitions, cell-state changes, or pipeline filtering using ggalluvial, networkD3, plotly, and consort.
joshua-zyy/academic-paper-writer
Search, verify, and map citations for CS/AI/ML papers. An agent skill from joshua-zyy/academic-paper-writer.
joshua-zyy/academic-paper-writer
Audit, run, or verify experimental evidence for CS/AI/ML papers.
joshua-zyy/academic-paper-writer
Self-review, audit, or verify CS/AI/ML paper drafts as a critical peer reviewer.
joshua-zyy/academic-paper-writer
A skill your agent uses when writing or revising CS/AI/ML papers from research notes, code repositories, local literature libraries, target venue requirements, or section-level drafting requests.
joshua-zyy/academic-paper-writer
Polish academic prose, de-AI-ify text, control claim strength, or rewrite method sections for CS/AI/ML papers.
joshua-zyy/academic-paper-writer
Research target venue requirements and writing style for CS/AI/ML papers.
Works with
Categories
Create, revise, or audit academic data/result figures for CS/AI/ML papers. Academic Figure is an agent skill from joshua-zyy/academic-paper-writer. Create, revise, or audit academic data/result figures for CS/AI/ML papers.
Academic Figure fits situations like: : generating plots from experiment results; auditing publication figures; suggesting data-driven figure types; revising chart colors/layouts/labels.
Run `npx skills add joshua-zyy/academic-paper-writer --skill academic-figure -a claude-code`. Or copy the skill folder (skills/academic-figure in joshua-zyy/academic-paper-writer) into .claude/skills/academic-figure in your project. Claude Code loads it when a task matches its description.
Run `npx skills add joshua-zyy/academic-paper-writer --skill academic-figure -a codex`. Or copy the skill folder (skills/academic-figure in joshua-zyy/academic-paper-writer) into .agents/skills/academic-figure in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add joshua-zyy/academic-paper-writer --skill academic-figure -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/academic-figure, .gemini/skills/academic-figure, .github/skills/academic-figure and .opencode/skills/academic-figure in your project.
Going by SKILL.md and its folder, Academic Figure needs Python for the scripts in its folder. Our summary lists: Python 3.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. The check reads SKILL.md only: the scripts in the folder are not scanned, so read them before running anything.
Academic Figure is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 816 tokens (SKILL.md is roughly 3.3k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 9.8k tokens, read only when the agent opens those files.
Skills that share tags, products or a category with Academic Figure: Scientific Schematics (jimmc414/Kosmos, 595 stars), Microsim Generator (dmccreary/ibook-skills, 105 stars), Scientific Figure Making (ChenLiu-1996/figures4papers, 8.3k stars) and Visualize (brycewang-stanford/Auto-Empirical-Research-Skills, 4.6k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
joshua-zyy (a GitHub user) maintains it in joshua-zyy/academic-paper-writer, which has 115 GitHub stars. The repository holds 8 skills in this directory. The repository was last updated on October 5, 2026.
Source: joshua-zyy/academic-paper-writer on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.