Knowledgebase
open-edge-platform/edge-ai-suites
Generic RAG query skill - Retrieve any information from the local knowledge base and generate structured reports, summaries, or Q&A responses.
Acts as a knowledge base providing environment checklists, directory/scratch management, and bash command templates.
$ npx skills add jinzhezenggroup/computational-chemistry-agent-skills --skill run-gauss -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install jinzhezenggroup/computational-chemistry-agent-skills run-gauss --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/jinzhezenggroup/computational-chemistry-agent-skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/quantum-chemistry/run-gauss .claude/skills/run-gauss && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "run-gauss" agent skill from https://github.com/jinzhezenggroup/computational-chemistry-agent-skills/tree/master/quantum-chemistry/run-gauss into .claude/skills/run-gauss/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "run-gauss", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/jinzhezenggroup/computational-chemistry-agent-skills/tree/master/quantum-chemistry/run-gaussType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add jinzhezenggroup/computational-chemistry-agent-skills --skill run-gauss -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install jinzhezenggroup/computational-chemistry-agent-skills run-gauss --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/jinzhezenggroup/computational-chemistry-agent-skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/quantum-chemistry/run-gauss .agents/skills/run-gauss && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "run-gauss" agent skill from https://github.com/jinzhezenggroup/computational-chemistry-agent-skills/tree/master/quantum-chemistry/run-gauss into .agents/skills/run-gauss/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "run-gauss", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add jinzhezenggroup/computational-chemistry-agent-skills --skill run-gauss -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install jinzhezenggroup/computational-chemistry-agent-skills run-gauss --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/jinzhezenggroup/computational-chemistry-agent-skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/quantum-chemistry/run-gauss .cursor/skills/run-gauss && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "run-gauss" agent skill from https://github.com/jinzhezenggroup/computational-chemistry-agent-skills/tree/master/quantum-chemistry/run-gauss into .cursor/skills/run-gauss/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "run-gauss", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/jinzhezenggroup/computational-chemistry-agent-skills.git --path quantum-chemistry/run-gauss--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add jinzhezenggroup/computational-chemistry-agent-skills --skill run-gauss -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install jinzhezenggroup/computational-chemistry-agent-skills run-gauss --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/jinzhezenggroup/computational-chemistry-agent-skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/quantum-chemistry/run-gauss .gemini/skills/run-gauss && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "run-gauss" agent skill from https://github.com/jinzhezenggroup/computational-chemistry-agent-skills/tree/master/quantum-chemistry/run-gauss into .gemini/skills/run-gauss/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "run-gauss", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install jinzhezenggroup/computational-chemistry-agent-skills run-gaussInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add jinzhezenggroup/computational-chemistry-agent-skills --skill run-gauss -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/jinzhezenggroup/computational-chemistry-agent-skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/quantum-chemistry/run-gauss .github/skills/run-gauss && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "run-gauss" agent skill from https://github.com/jinzhezenggroup/computational-chemistry-agent-skills/tree/master/quantum-chemistry/run-gauss into .github/skills/run-gauss/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "run-gauss", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add jinzhezenggroup/computational-chemistry-agent-skills --skill run-gauss -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install jinzhezenggroup/computational-chemistry-agent-skills run-gauss --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/jinzhezenggroup/computational-chemistry-agent-skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/quantum-chemistry/run-gauss .opencode/skills/run-gauss && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "run-gauss" agent skill from https://github.com/jinzhezenggroup/computational-chemistry-agent-skills/tree/master/quantum-chemistry/run-gauss into .opencode/skills/run-gauss/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "run-gauss", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
run-gaussActs as a knowledge base providing environment checklists, directory/scratch management, and bash command templates.
Run Gauss is an agent skill from jinzhezenggroup/computational-chemistry-agent-skills. Acts as a knowledge base providing environment checklists, directory/scratch management, and bash command templates. USE WHEN you need to guide the execution of Gaussian computational chemistry jobs (.gjf) on local or remote/HPC environments.
Its SKILL.md is about 400 tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Knowledge Management, covering Knowledge bases. It works with Bash. The repository describes itself as: Agent skills to run computational-chemistry tasks, used in OpenClaw. The licence is LGPL-3.0-or-later.
Read from SKILL.md and the folder at commit 5c19e75. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md (its code samples are bash).
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Run Gauss loads about 398 tokens when it runs. Until then it costs about 63 tokens; SKILL.md has 118 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from jinzhezenggroup/computational-chemistry-agent-skills at commit 5c19e75, republished under its LGPL-3.0-or-later licence (© jinzhezenggroup). 118 words, ~398 tokens.
.claude/skills/run-gauss/SKILL.md (or your agent's skills folder).<local> or <remote/HPC> (and scheduler if any)<env_setup_cmds> (e.g. module load / source script)<gaussian_exec> (e.g. g16, g09, or absolute path)<local_work_dir> (if applicable)<remote_work_dir> (if applicable)<task_work_dir><input.gjf><gaussian_log><stdout_log>, <stderr_log>GAUSS_SCRDIR=<scratch_dir> (e.g. ./scratch, $TMPDIR, or site-provided scratch)<env_setup_cmds>
export GAUSS_SCRDIR=<scratch_dir>
mkdir -p "$GAUSS_SCRDIR"
<gaussian_exec> < <input.gjf> > <gaussian_log>
rm -rf "$GAUSS_SCRDIR".gjf (when there is not an existing one)Use gjf-flux to extract/assemble .gjf sections and build workflows.
Find the extract/assemble skill: gjf-flux
Recommend using dpdispatcher to submit Gaussian calculations.
Find the submission skill: dpdisp-submit
© jinzhezenggroup, LGPL-3.0-or-later. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Just SKILL.md in quantum-chemistry/run-gauss of jinzhezenggroup/computational-chemistry-agent-skills.
Open the folder on GitHubat commit 5c19e75
Run Gauss next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Run Gauss this skilljinzhezenggroup/computational-chemistry-agent-skills | 148 | — | ~398 | Automated safety check: Pass | LGPL-3.0-or-later | |
| Knowledgebaseopen-edge-platform/edge-ai-suites | 140 | — | ~900 | Automated safety check: Pass | Apache-2.0 | |
| Knowledge Searchdataelement/bisheng | 12k | — | ~1.1k | Automated safety check: Pass | Apache-2.0 | |
| Capture Conversationoutline/outline | 41k | — | ~474 | Automated safety check: Pass | Custom licence | |
| Find And Citeoutline/outline | 41k | — | ~537 | Automated safety check: Pass | Custom licence | |
| Xhs Virtual Productchenjin-cmd/xhs-virtual-product | 729 | — | ~862 | Automated safety check: Pass | MIT |
open-edge-platform/edge-ai-suites
Generic RAG query skill - Retrieve any information from the local knowledge base and generate structured reports, summaries, or Q&A responses.
dataelement/bisheng
Search the user's knowledge bases and knowledge spaces (企业知识库检索).
outline/outline
Save the current conversation, a decision, or a set of notes as a document in an Outline collection; use when the user wants to keep what was discussed in their knowledge base.
outline/outline
Answer questions from the Outline knowledge base with quotes and links to the source documents; use when the user asks what the team knows, documented, or decided about a topic.
chenjin-cmd/xhs-virtual-product
This skill helps plan, select, produce, and market Xiaohongshu (RED) virtual/digital products — templates, knowledge bases, test tools, study materials.
VectifyAI/OpenKB
A skill your agent uses when the user asks about content in their OpenKB knowledge base — research topics, concepts compiled from their documents, cross-document synthesis — or mentions openkb, an…
jinzhezenggroup/computational-chemistry-agent-skills
Turns a user-supplied atomic structure and DFT settings into a runnable Quantum ESPRESSO input file, stopping short of submitting the job.
jinzhezenggroup/computational-chemistry-agent-skills
Prepares, validates and runs DP-GEN simplify jobs that thin out repeated or redundant DeepMD datasets, generating param.json and machine.json for local or scheduler runs.
jinzhezenggroup/computational-chemistry-agent-skills
Prepares and runs molecular dynamics simulations in LAMMPS with a DeePMD machine-learning potential, writing the input script and choosing NVE, NVT or NPT.
jinzhezenggroup/computational-chemistry-agent-skills
Prepares and explains LAMMPS input scripts for reactive molecular dynamics with the ReaxFF potential, including charge equilibration and ensemble choice.
jinzhezenggroup/computational-chemistry-agent-skills
Generates 3D molecular conformers from SMILES strings or files with RDKit, keeps the lowest-energy one per molecule, and falls back to 2D coordinates when embedding fails.
jinzhezenggroup/computational-chemistry-agent-skills
Computes RDKit physicochemical descriptors and molecular fingerprints from SMILES through a uv-run CLI script that skips and logs invalid molecules.
Works with
Categories
Acts as a knowledge base providing environment checklists, directory/scratch management, and bash command templates. Run Gauss is an agent skill from jinzhezenggroup/computational-chemistry-agent-skills. Acts as a knowledge base providing environment checklists, directory/scratch management, and bash command templates.
Run Gauss fits situations like: you need to guide the execution of Gaussian computational chemistry jobs (.gjf) on local; remote/HPC environments.
Run `npx skills add jinzhezenggroup/computational-chemistry-agent-skills --skill run-gauss -a claude-code`. Or copy the skill folder (quantum-chemistry/run-gauss in jinzhezenggroup/computational-chemistry-agent-skills) into .claude/skills/run-gauss in your project. Claude Code loads it when a task matches its description.
Run `npx skills add jinzhezenggroup/computational-chemistry-agent-skills --skill run-gauss -a codex`. Or copy the skill folder (quantum-chemistry/run-gauss in jinzhezenggroup/computational-chemistry-agent-skills) into .agents/skills/run-gauss in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add jinzhezenggroup/computational-chemistry-agent-skills --skill run-gauss -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/run-gauss, .gemini/skills/run-gauss, .github/skills/run-gauss and .opencode/skills/run-gauss in your project.
SKILL.md names no scripts, command-line tools or credentials: Run Gauss is instructions for the agent only.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Run Gauss is published under the LGPL-3.0-or-later licence (declared in SKILL.md). It allows redistribution, so the full SKILL.md is shown on this page.
About 398 tokens (SKILL.md is roughly 1.6k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Run Gauss: Knowledgebase (open-edge-platform/edge-ai-suites, 140 stars), Knowledge Search (dataelement/bisheng, 12k stars), Capture Conversation (outline/outline, 41k stars) and Find And Cite (outline/outline, 41k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
jinzhezenggroup (a GitHub organization) maintains it in jinzhezenggroup/computational-chemistry-agent-skills, which has 148 GitHub stars. The repository holds 62 skills in this directory. The repository was last updated on October 9, 2026.
Source: jinzhezenggroup/computational-chemistry-agent-skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.