Startup It Troubleshooting
sickn33/agentic-awesome-skills
Practical IT troubleshooting playbooks for small teams without dedicated IT staff.
Build, run, validate, and troubleshoot CatMAP microkinetic models for heterogeneous catalysis.
Custom licenceAuto-check passed
Install Catmap
$ npx skills add JCLiuGroup/AI-Computational-Chemist --skill catmap -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install JCLiuGroup/AI-Computational-Chemist catmap --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/JCLiuGroup/AI-Computational-Chemist.git skills-src && mkdir -p .claude/skills && cp -r skills-src/tools/catmap .claude/skills/catmap && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "catmap" agent skill from https://github.com/JCLiuGroup/AI-Computational-Chemist/tree/main/tools/catmap into .claude/skills/catmap/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "catmap", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/JCLiuGroup/AI-Computational-Chemist/tree/main/tools/catmapType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add JCLiuGroup/AI-Computational-Chemist --skill catmap -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install JCLiuGroup/AI-Computational-Chemist catmap --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/JCLiuGroup/AI-Computational-Chemist.git skills-src && mkdir -p .agents/skills && cp -r skills-src/tools/catmap .agents/skills/catmap && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "catmap" agent skill from https://github.com/JCLiuGroup/AI-Computational-Chemist/tree/main/tools/catmap into .agents/skills/catmap/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "catmap", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add JCLiuGroup/AI-Computational-Chemist --skill catmap -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install JCLiuGroup/AI-Computational-Chemist catmap --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/JCLiuGroup/AI-Computational-Chemist.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/tools/catmap .cursor/skills/catmap && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "catmap" agent skill from https://github.com/JCLiuGroup/AI-Computational-Chemist/tree/main/tools/catmap into .cursor/skills/catmap/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "catmap", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/JCLiuGroup/AI-Computational-Chemist.git --path tools/catmap--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add JCLiuGroup/AI-Computational-Chemist --skill catmap -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install JCLiuGroup/AI-Computational-Chemist catmap --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/JCLiuGroup/AI-Computational-Chemist.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/tools/catmap .gemini/skills/catmap && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "catmap" agent skill from https://github.com/JCLiuGroup/AI-Computational-Chemist/tree/main/tools/catmap into .gemini/skills/catmap/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "catmap", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install JCLiuGroup/AI-Computational-Chemist catmapInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add JCLiuGroup/AI-Computational-Chemist --skill catmap -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/JCLiuGroup/AI-Computational-Chemist.git skills-src && mkdir -p .github/skills && cp -r skills-src/tools/catmap .github/skills/catmap && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "catmap" agent skill from https://github.com/JCLiuGroup/AI-Computational-Chemist/tree/main/tools/catmap into .github/skills/catmap/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "catmap", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add JCLiuGroup/AI-Computational-Chemist --skill catmap -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install JCLiuGroup/AI-Computational-Chemist catmap --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/JCLiuGroup/AI-Computational-Chemist.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/tools/catmap .opencode/skills/catmap && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "catmap" agent skill from https://github.com/JCLiuGroup/AI-Computational-Chemist/tree/main/tools/catmap into .opencode/skills/catmap/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "catmap", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
catmap- GitHub stars
- 145
- Used in
- 1 other repo
- Token cost
- ~649 tokens
- SKILL.md length
- 253 words
- Files
- 6 (incl. references)
- Skills in repo
- 21
- Repo updated
- First seen
- Licence
- Custom licence
At a glance
Build, run, validate, and troubleshoot CatMAP microkinetic models for heterogeneous catalysis.
- Works in 6 steps: Build a balanced mechanism from the VASP… → Assemble energies.txt with species… → Write .mkm: rxn_expressions,… → …
- Energies.txt files
- SKILL.md covers Required inputs, Where to find what, Workflow and Hard guardrails
- Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
What it does
Catmap is an agent skill from JCLiuGroup/AI-Computational-Chemist. Build, run, validate, and troubleshoot CatMAP microkinetic models for heterogeneous catalysis. Use for energies.txt files, .mkm setup files, ReactionModel jobs, thermodynamic/descriptor scaling, steady-state coverages, TOF/production-rate maps, volcano plots, reaction-order/apparent-barrier studies, and CatMAP-specific errors.
Its SKILL.md is about 650 tokens, which your agent loads only when the skill is triggered. The skill folder holds 7 other files, including reference files (for example `examples/README.md`, `references/errors.md` and `references/resources.md`).
When your agent uses it
- Energies.txt files
- .mkm setup files
- ReactionModel jobs
- Thermodynamic/descriptor scaling
Example prompts
- “/catmap”
Workflow steps
6 steps, taken from the first numbered list in SKILL.md.
- Build a balanced mechanism from the VASP surface-kinetics reference.
- Assemble energies.txt with species names, site names, energies, frequencies, and references.
- Write .mkm: rxn_expressions, descriptors, species definitions, thermochemistry/scaler settings, numerical precision, and output variables.
- Run mkm_job.py with ReactionModel.
- Validate that all descriptor points solved, coverages close site balances, rates have sensible sign/magnitude, and thermodynamics is…
- Analyze maps with CatMAP analyzers only after validation.
What it can do on your machine
Read from SKILL.md and the folder at commit e27b555. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Catmap loads about 649 tokens when it runs, and up to ~3.4k if it reads all its reference files. Until then it costs about 84 tokens; SKILL.md has 253 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
Its licence (Custom licence) doesn't allow us to republish the file, so here is its outline and opening line. It has 253 words (~649 tokens).
“CatMAP is an independent microkinetic modeling tool. Use VASP/VASPKIT skills to generate consistent free energies, then use this skill to encode the mechanism, solve the mean-field model, and analyze rates/coverages/selectivity.”
- name
- catmap
Files
SKILL.md and 5 other files (references) in tools/catmap of JCLiuGroup/AI-Computational-Chemist.
- SKILL.md
- examples/README.md
- references/errors.md
- references/resources.md
- references/running.md
- references/validation.md
Open the folder on GitHubat commit e27b555
Used in 1 other repository
We found 2 copies of this SKILL.md (exact, near-identical or edited) in other folders, from 1 other GitHub owner. This page covers the copy in JCLiuGroup/AI-Computational-Chemist, which our catalogue first saw on October 7, 2026.
Compare with similar skills
Catmap next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Catmap this skillJCLiuGroup/AI-Computational-Chemist | 145 | 1 repos | ~649 | Automated safety check: Pass | Custom licence | |
| Startup It Troubleshootingsickn33/agentic-awesome-skills | 47k | 2 repos | ~3.6k | Automated safety check: Notes | MIT | |
| Troubleshootingcartography-cncf/cartography | 4.1k | — | ~2.5k | Automated safety check: Pass | Apache-2.0 | |
| Power Bi Performance Troubleshootinggithub/awesome-copilot | 40k | 1 repos | ~2.6k | Automated safety check: Pass | MIT | |
| WxJava Troubleshooterbinarywang/WxJava | 33k | — | ~135 | Automated safety check: Pass | Apache-2.0 | |
| Bigquery Troubleshootinggoogle/skills | 21k | — | ~2.5k | Automated safety check: Pass | Apache-2.0 |
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Questions about Catmap
What does Catmap do?
Build, run, validate, and troubleshoot CatMAP microkinetic models for heterogeneous catalysis. Catmap is an agent skill from JCLiuGroup/AI-Computational-Chemist. Build, run, validate, and troubleshoot CatMAP microkinetic models for heterogeneous catalysis.
When should I use Catmap?
Catmap fits situations like: energies.txt files; .mkm setup files; reactionModel jobs; thermodynamic/descriptor scaling.
How do I install Catmap in Claude Code?
Run `npx skills add JCLiuGroup/AI-Computational-Chemist --skill catmap -a claude-code`. Or copy the skill folder (tools/catmap in JCLiuGroup/AI-Computational-Chemist) into .claude/skills/catmap in your project. Claude Code loads it when a task matches its description.
How do I install Catmap in Codex?
Run `npx skills add JCLiuGroup/AI-Computational-Chemist --skill catmap -a codex`. Or copy the skill folder (tools/catmap in JCLiuGroup/AI-Computational-Chemist) into .agents/skills/catmap in your project. Codex loads it when a task matches its description.
Can I use Catmap in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add JCLiuGroup/AI-Computational-Chemist --skill catmap -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/catmap, .gemini/skills/catmap, .github/skills/catmap and .opencode/skills/catmap in your project.
What does Catmap need to run?
SKILL.md names no scripts, command-line tools or credentials: Catmap is instructions for the agent only.
Does Catmap access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Catmap safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Catmap use?
Catmap has a licence file (the repository's licence) that doesn't match a standard licence. Read it on GitHub before reusing the skill.
How many tokens does Catmap use?
About 649 tokens (SKILL.md is roughly 2.6k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 2.8k tokens, read only when the agent opens those files.
What are the alternatives to Catmap?
Skills that share tags, products or a category with Catmap: Startup It Troubleshooting (sickn33/agentic-awesome-skills, 47k stars), Troubleshooting (cartography-cncf/cartography, 4.1k stars), Power Bi Performance Troubleshooting (github/awesome-copilot, 40k stars) and WxJava Troubleshooter (binarywang/WxJava, 33k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Catmap?
JCLiuGroup (a GitHub organization) maintains it in JCLiuGroup/AI-Computational-Chemist, which has 145 GitHub stars. The repository holds 21 skills in this directory. The repository was last updated on September 27, 2026.
Source: JCLiuGroup/AI-Computational-Chemist on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.