Scikit Learn
zLanqing/codex-claude-academic-skills
Machine learning in Python with scikit-learn. An agent skill from zLanqing/codex-claude-academic-skills.
A skill your agent uses when the user asks to reproduce the Kreitz 2021 Ni surface benchmark, run the MACE Ni benchmark, or compare a machine-learning potential (MACE, CHGNet, M3GNet) against DFT-D3…
$ npx skills add Hello-QM/catgo-LRG --skill mace-ni-benchmark -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install Hello-QM/catgo-LRG mace-ni-benchmark --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/Hello-QM/catgo-LRG.git skills-src && mkdir -p .claude/skills && cp -r skills-src/server/catgo/workflow/skills/analysis/mace_ni_benchmark .claude/skills/mace-ni-benchmark && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "mace-ni-benchmark" agent skill from https://github.com/Hello-QM/catgo-LRG/tree/main/server/catgo/workflow/skills/analysis/mace_ni_benchmark into .claude/skills/mace-ni-benchmark/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "mace-ni-benchmark", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/Hello-QM/catgo-LRG/tree/main/server/catgo/workflow/skills/analysis/mace_ni_benchmarkType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add Hello-QM/catgo-LRG --skill mace-ni-benchmark -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install Hello-QM/catgo-LRG mace-ni-benchmark --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Hello-QM/catgo-LRG.git skills-src && mkdir -p .agents/skills && cp -r skills-src/server/catgo/workflow/skills/analysis/mace_ni_benchmark .agents/skills/mace-ni-benchmark && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "mace-ni-benchmark" agent skill from https://github.com/Hello-QM/catgo-LRG/tree/main/server/catgo/workflow/skills/analysis/mace_ni_benchmark into .agents/skills/mace-ni-benchmark/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "mace-ni-benchmark", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add Hello-QM/catgo-LRG --skill mace-ni-benchmark -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install Hello-QM/catgo-LRG mace-ni-benchmark --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Hello-QM/catgo-LRG.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/server/catgo/workflow/skills/analysis/mace_ni_benchmark .cursor/skills/mace-ni-benchmark && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "mace-ni-benchmark" agent skill from https://github.com/Hello-QM/catgo-LRG/tree/main/server/catgo/workflow/skills/analysis/mace_ni_benchmark into .cursor/skills/mace-ni-benchmark/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "mace-ni-benchmark", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/Hello-QM/catgo-LRG.git --path server/catgo/workflow/skills/analysis/mace_ni_benchmark--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add Hello-QM/catgo-LRG --skill mace-ni-benchmark -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install Hello-QM/catgo-LRG mace-ni-benchmark --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Hello-QM/catgo-LRG.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/server/catgo/workflow/skills/analysis/mace_ni_benchmark .gemini/skills/mace-ni-benchmark && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "mace-ni-benchmark" agent skill from https://github.com/Hello-QM/catgo-LRG/tree/main/server/catgo/workflow/skills/analysis/mace_ni_benchmark into .gemini/skills/mace-ni-benchmark/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "mace-ni-benchmark", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install Hello-QM/catgo-LRG mace-ni-benchmarkInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add Hello-QM/catgo-LRG --skill mace-ni-benchmark -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/Hello-QM/catgo-LRG.git skills-src && mkdir -p .github/skills && cp -r skills-src/server/catgo/workflow/skills/analysis/mace_ni_benchmark .github/skills/mace-ni-benchmark && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "mace-ni-benchmark" agent skill from https://github.com/Hello-QM/catgo-LRG/tree/main/server/catgo/workflow/skills/analysis/mace_ni_benchmark into .github/skills/mace-ni-benchmark/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "mace-ni-benchmark", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add Hello-QM/catgo-LRG --skill mace-ni-benchmark -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install Hello-QM/catgo-LRG mace-ni-benchmark --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/Hello-QM/catgo-LRG.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/server/catgo/workflow/skills/analysis/mace_ni_benchmark .opencode/skills/mace-ni-benchmark && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "mace-ni-benchmark" agent skill from https://github.com/Hello-QM/catgo-LRG/tree/main/server/catgo/workflow/skills/analysis/mace_ni_benchmark into .opencode/skills/mace-ni-benchmark/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "mace-ni-benchmark", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
mace-ni-benchmarkA skill your agent uses when the user asks to reproduce the Kreitz 2021 Ni surface benchmark, run the MACE Ni benchmark, or compare a machine-learning potential (MACE, CHGNet, M3GNet) against DFT-D3…
Mace Ni Benchmark is an agent skill from Hello-QM/catgo-LRG. Use when the user asks to reproduce the Kreitz 2021 Ni surface benchmark, run the MACE Ni benchmark, or compare a machine-learning potential (MACE, CHGNet, M3GNet) against DFT-D3 surface-science references. Invokes the "UMA Catalysis Tutorial" preset (template key umacatalysisscreening).
Its SKILL.md is about 1.3k tokens, which your agent loads only when the skill is triggered. The skill folder holds 1 other file (for example `README.md`).
It sits in Data & Analytics, covering Machine learning. The repository describes itself as: AI-driven workbench for computational materials science — interactive 3D structure viewer, natural-language CatBot assistant, visual DAG workflow engine, HPC job submission… The licence is AGPL-3.0.
4 steps, taken from the first numbered list in SKILL.md.
Read from SKILL.md and the folder at commit fd6291b. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md (its code samples are json).
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Mace Ni Benchmark loads about 1.3k tokens when it runs. Until then it costs about 78 tokens; SKILL.md has 605 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from Hello-QM/catgo-LRG at commit fd6291b, republished under its AGPL-3.0 licence (© Hello-QM). 605 words, ~1,271 tokens.
.claude/skills/mace-ni-benchmark/SKILL.md (or your agent's skills folder). This skill also uses 1 other file; get the full folder from GitHub.Reproduces six Ni surface DFT-D3 target quantities end-to-end with MACE-MP-0, on a single Ni bulk source, in one workflow.
Trigger phrases (any of):
Also invoke when the user asks to compute multiple of the six quantities below for Ni at once — one preset is cheaper than six separate workflows.
| # | Quantity | Source node | Result key |
|---|---|---|---|
| 1 | γ(111), γ(100), γ(110), γ(211) | surface_energy | per_facet[hkl].gamma_J_per_m2 |
| 2 | Wulff facet area fractions | wulff_construction | area_fractions[hkl] |
| 3 | H adsorption energy on Ni(111) FCC hollow (ZPE-corrected) | adsorption_energy | E_ads_ZPE_eV |
| 4 | Coverage slope ∂E_ads/∂θ (1,2,4,8,16 H on 4×4 Ni(111)) | coverage_analysis | fit.slope |
| 5 | CO* ↔ C* + O* NEB barrier | ts_search (mlp_neb) | activation_barrier_kcal_mol |
| 6 | TS imaginary-mode frequency | freq (mlp_vibrations) | dominant_imag_freq_cm (with is_valid_ts flag) |
All six are viewable side-by-side in the project dashboard's "Benchmark"
tab once any workflow derived from uma_catalysis_screening (or with a
matching name) is present in the project.
In the Workflow Editor, click New from preset → Surface Catalysis →
UMA Catalysis Tutorial. A 26-node DAG loads. The template is defined
in src/lib/workflow/graph-model.ts::uma_catalysis_screening.
After it loads, the user must load structures into 4 input nodes:
Ni bulk (FCC) — fcc Ni, a ≈ 3.524 Å (Materials Project mp-23)H₂ molecule — two H atoms ~0.74 Å apart in a 20 Å boxCO* on Ni(111) — NEB reactant (CO adsorbed on a 3×3 Ni(111) slab)C* + O* on Ni(111) — NEB product (C and O separately adsorbed)Rebuilding the 26-node DAG by hand costs ~2x the effort and always drifts from the defaults tested against MACE-MP-0 medium. Only do this if the user needs a custom variant (e.g. different slab supercell, or a non-cubic/non-Ni system).
| Quantity | Typical |CatGo − Kreitz| | Notes |
|---|---|---|
| γ(hkl) | ~0.1 J/m² | γ(111) tends to be ~0.05 J/m² higher |
| Wulff fractions | < 0.05 | Dominant (111) facet rank is preserved |
| E_ads(H, ZPE) | ~0.1 eV | MACE-MP-0 slightly overbinds H |
| Coverage slope | ~0.03 eV/ML | Sign (repulsive) should match |
| NEB barrier | ~0.2 eV | Largest single deviation |
| ν_imag | ~50 cm⁻¹ | Sign must be negative (imaginary) |
If deviations are much larger than these ranges, check:
fmax < 0.05 eV/Å with relax_cell: true)neb_converged: true)is_valid_ts: true on the freq step at the TS? (Exactly one
imaginary mode above the 20 cm⁻¹ trivial-mode filter.)software: mlp, model: MACE, device: auto → uses MACE-MP-0 medium
via the default mace_mp("medium", default_dtype="float64") path.
Checkpoint auto-downloads to ~/.cache/mace/ on first run
(~200 MB, ~2 min).freeze_mode: layers, freeze_layers: 2, freeze_invert: false) →
~20× cheaper freqs without losing ZPE accuracy. Note: freeze_invert
inverts the set of atoms ASE displaces, so false here means the
frozen set (bottom 2 Ni layers) is actually frozen and everything
else vibrates — the standard catalysis setup. true would vibrate
only the bottom 2 Ni layers (wrong for ZPE).climb: true, FIRE optimizer, fmax: 0.05 eV/Å.Every MLP-dispatched step writes metadata.json (captured via the C1
footer in server/workflow/engines/mlp.py) into result_json.metadata:
{
"mace_torch_version": "0.3.15",
"torch_version": "2.10.0",
"mace_model": "mace-mp-0-medium",
"model_sha256": null,
"device": "cuda:0" | "cpu",
"gpu_name": "...",
"wall_time_s": 12.3,
"host": "...",
"timestamp": "..."
}The Benchmark tab surfaces the latest MLP step's metadata panel. Users export CSV from the same tab to share the full 6-row table with the metadata footer included as RFC-4180-escaped comment lines.
structure/slab/ — slab generation internalsadsorption/ — the general E_ads formula this preset specializesoer/, her/ — if the user wants surface reactivity trends on top of γ(hkl)© Hello-QM, AGPL-3.0. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
SKILL.md and 1 other file in server/catgo/workflow/skills/analysis/mace_ni_benchmark of Hello-QM/catgo-LRG.
Open the folder on GitHubat commit fd6291b
Mace Ni Benchmark next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Mace Ni Benchmark this skillHello-QM/catgo-LRG | 205 | — | ~1.3k | Automated safety check: Pass | AGPL-3.0 | |
| Scikit LearnzLanqing/codex-claude-academic-skills | 4.7k | 16 repos | ~3.9k | Automated safety check: Pass | BSD-3-Clause | |
| Agentic Kaggle WorkflowFrankS-IntelLab/agentic-kaggle-skill | 188 | — | ~4k | Automated safety check: Pass | MIT | |
| Senior Data ScientistRaidriar7170/hermes-skilleval | 125 | 5 repos | ~1.4k | Automated safety check: Pass | MIT | |
| Geomlitalo-goncalves/geoML | 109 | — | ~4.9k | Automated safety check: Pass | GPL-3.0 | |
| QuantMind Training Config Generatorqusong0627/QuantMind | 1.7k | — | ~1.5k | Automated safety check: Pass | AGPL-3.0 |
zLanqing/codex-claude-academic-skills
Machine learning in Python with scikit-learn. An agent skill from zLanqing/codex-claude-academic-skills.
FrankS-IntelLab/agentic-kaggle-skill
Takes a Kaggle competition from rules and validation design through baselines, ensembling and notebook architecture to a scored submission.
Raidriar7170/hermes-skilleval
World-class data science skill for statistical modeling, experimentation, causal inference, and advanced analytics.
italo-goncalves/geoML
Working knowledge of the geoML Python package (github.com/italo-goncalves/geoML): variational Gaussian processes for spatial data, implicit geological modelling, block models, drillhole data…
qusong0627/QuantMind
Turns a plain-language model training request into a validated QuantMind training config file that can be imported from the Model Training page.
liangdabiao/claude-data-analysis-ultra-main
Analyze user retention and churn using survival analysis, cohort analysis, and machine learning.
Hello-QM/catgo-LRG
Drive a file-first, agent-in-the-loop computational campaign via a folder + markdown tree (no DB).
Hello-QM/catgo-LRG
Compute adsorption/reaction Gibbs free energies, free-energy diagrams, and electrochemical overpotentials (HER/ORR/OER/CO2RR/NRR) with VASP.
Hello-QM/catgo-LRG
Generate and manage ABINIT DFT calculations. An agent skill from Hello-QM/catgo-LRG.
Hello-QM/catgo-LRG
A skill your agent uses when the user asks to place an adsorbate molecule on a surface, find adsorption sites, or set up a surface+adsorbate model for DFT.
Hello-QM/catgo-LRG
A skill your agent uses when the user asks for adsorption energy, binding energy, or wants to compare how strongly a molecule binds to a surface.
Hello-QM/catgo-LRG
A skill your agent uses when the user asks to analyze computational results: Gibbs free energy, OER/HER/CO2RR overpotentials, adsorption energy, convergence tests, DOS/d-band analysis, or Bader…
Categories
A skill your agent uses when the user asks to reproduce the Kreitz 2021 Ni surface benchmark, run the MACE Ni benchmark, or compare a machine-learning potential (MACE, CHGNet, M3GNet) against DFT-D3…. Mace Ni Benchmark is an agent skill from Hello-QM/catgo-LRG. Use when the user asks to reproduce the Kreitz 2021 Ni surface benchmark, run the MACE Ni benchmark, or compare a machine-learning potential (MACE, CHGNet, M3GNet) against DFT-D3 surface-science references.
Mace Ni Benchmark fits situations like: the user asks to reproduce the Kreitz 2021 Ni surface benchmark; run the MACE Ni benchmark; compare a machine-learning potential (MACE; M3GNet) against DFT-D3 surface-science references.
Run `npx skills add Hello-QM/catgo-LRG --skill mace-ni-benchmark -a claude-code`. Or copy the skill folder (server/catgo/workflow/skills/analysis/mace_ni_benchmark in Hello-QM/catgo-LRG) into .claude/skills/mace-ni-benchmark in your project. Claude Code loads it when a task matches its description.
Run `npx skills add Hello-QM/catgo-LRG --skill mace-ni-benchmark -a codex`. Or copy the skill folder (server/catgo/workflow/skills/analysis/mace_ni_benchmark in Hello-QM/catgo-LRG) into .agents/skills/mace-ni-benchmark in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add Hello-QM/catgo-LRG --skill mace-ni-benchmark -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/mace-ni-benchmark, .gemini/skills/mace-ni-benchmark, .github/skills/mace-ni-benchmark and .opencode/skills/mace-ni-benchmark in your project.
SKILL.md names no scripts, command-line tools or credentials: Mace Ni Benchmark is instructions for the agent only.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Mace Ni Benchmark is published under the AGPL-3.0 licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 1.3k tokens (SKILL.md is roughly 5.1k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Mace Ni Benchmark: Scikit Learn (zLanqing/codex-claude-academic-skills, 4.7k stars), Agentic Kaggle Workflow (FrankS-IntelLab/agentic-kaggle-skill, 188 stars), Senior Data Scientist (Raidriar7170/hermes-skilleval, 125 stars) and Geoml (italo-goncalves/geoML, 109 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Hello-QM (a GitHub user) maintains it in Hello-QM/catgo-LRG, which has 205 GitHub stars. The repository holds 75 skills in this directory. The repository was last updated on September 22, 2026.
Source: Hello-QM/catgo-LRG on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.