Agent skill

Gaussian

by Hello-QM in Hello-QM/catgo-LRG

Generate and manage Gaussian calculations. An agent skill from Hello-QM/catgo-LRG.

AGPL-3.0Auto-check passedResearch & Science

Install Gaussian

skills CLI
$ npx skills add Hello-QM/catgo-LRG --skill gaussian -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install Hello-QM/catgo-LRG gaussian --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/Hello-QM/catgo-LRG.git skills-src && mkdir -p .claude/skills && cp -r skills-src/.claude/skills/gaussian .claude/skills/gaussian && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
gaussian
GitHub stars
205
Token cost
~1.2k tokens
SKILL.md length
376 words
Files
1
Skills in repo
75
Repo updated
First seen
Licence
AGPL-3.0

At a glance

Generate and manage Gaussian calculations. An agent skill from Hello-QM/catgo-LRG.

  • Works in 3 steps: Verify structure → Create workflow → Add Gaussian task via shell
  • The user requests Gaussian
  • SKILL.md covers When to Use, Prerequisites, Workflow Steps and Input File Template —…, plus 5 more sections
  • Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md

What it does

Gaussian is an agent skill from Hello-QM/catgo-LRG. Generate and manage Gaussian calculations. Use when the user requests Gaussian, G16, GJF files, or needs hybrid functionals (B3LYP), MP2, CCSD(T), or molecular quantum chemistry with Gaussian basis sets.

Its SKILL.md is about 1.2k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts. Compatibility notes: Requires a valid Gaussian license and installation on the HPC target. Gaussian is commercial software — never distribute binaries or bypass license checks.

It sits in Research & Science. The repository describes itself as: AI-driven workbench for computational materials science — interactive 3D structure viewer, natural-language CatBot assistant, visual DAG workflow engine, HPC job submission… The licence is AGPL-3.0.

When your agent uses it

  • The user requests Gaussian
  • Needs hybrid functionals (B3LYP)
  • Molecular quantum chemistry with Gaussian basis sets

Example prompts

  • “/gaussian”

Requirements

  • Compatibility (from SKILL.md): Requires a valid Gaussian license and installation on the HPC target. Gaussian is commercial software — never distribute binaries or bypass license checks.

Workflow steps

3 steps, taken from the step headings in SKILL.md.

  1. Verify structure
  2. Create workflow
  3. Add Gaussian task via shell

What it can do on your machine

Read from SKILL.md and the folder at commit fd6291b. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    No scripts in the folder and no shell commands in SKILL.md.

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

  • Compatibility

    Requires a valid Gaussian license and installation on the HPC target. Gaussian is commercial software — never distribute binaries or bypass license checks.

    From compatibility in the SKILL.md frontmatter.

Context cost

Gaussian loads about 1.2k tokens when it runs. Until then it costs about 53 tokens; SKILL.md has 376 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~53
When it runs · the whole SKILL.md, loaded when a task matches
~1.2k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from Hello-QM/catgo-LRG at commit fd6291b, republished under its AGPL-3.0 licence (© Hello-QM). 376 words, ~1,187 tokens.

Download SKILL.mdSave it as .claude/skills/gaussian/SKILL.md (or your agent's skills folder).
name
gaussian
description
Generate and manage Gaussian calculations. Use when the user requests Gaussian, G16, GJF files, or needs hybrid functionals (B3LYP), MP2, CCSD(T), or molecular quantum chemistry with Gaussian basis sets.
compatibility
Requires a valid Gaussian license and installation on the HPC target. Gaussian is commercial software — never distribute binaries or bypass license checks.

Gaussian

When to Use

  • User explicitly requests Gaussian, G16, G09
  • User needs molecular quantum chemistry (not periodic solids — use VASP/QE for that)
  • User wants hybrid functionals (B3LYP, PBE0, M06-2X) for molecules
  • User needs post-HF methods: MP2, CCSD(T), CBS extrapolation
  • User wants transition state search with QST2/QST3
  • User requests GJF/COM input file generation

Prerequisites

  1. Gaussian (g16/g09) accessible on HPC with valid license
  2. Sufficient memory and scratch space (Gaussian is memory-intensive)
  3. Structure loaded in viewer — verify with catgo_view(action="get_state")

Workflow Steps

1. Verify structure
catgo_view(action="get_state")
2. Create workflow
catgo_workflow_engine(action="create", params={"name": "Gaussian B3LYP opt+freq"})
3. Add Gaussian task via shell

CatGo does not yet have a native Gaussian engine. Use task_type: "shell".

catgo_workflow_engine(action="add_task", params={
  "workflow_id": "wf_xxx",
  "task_type": "shell",
  "name": "g16_opt",
  "command": "g16 < input.gjf > output.log 2>&1",
  "input_files": {
    "input.gjf": "<GJF content>"
  },
  "system_name": "caffeine_opt"
})

When a @register_engine("gaussian") is added, use task_type: "geo_opt" with software: "gaussian".

Input File Template — Optimization + Frequencies

%nproc=16
%mem=32GB
%chk=checkpoint.chk
# opt freq b3lyp/6-311+g(d,p) empiricaldispersion=gd3bj
  scf=tight int=ultrafine

Title: Geometry optimization with frequency analysis

0 1
C    0.000000    0.000000    0.000000
H    0.000000    0.000000    1.089000
H    1.026719    0.000000   -0.363000
H   -0.513360   -0.889165   -0.363000
H   -0.513360    0.889165   -0.363000

Important: The blank line after coordinates is mandatory. A second blank line terminates the input.

Input File Structure

%nproc=<cores>                    # Link 0 commands (resources)
%mem=<memory>
%chk=<checkpoint_file>
# <method>/<basis> <keywords>     # Route section

<title>                           # Title (free text)

<charge> <multiplicity>           # Charge and spin
<element> <x> <y> <z>            # Cartesian coordinates
                                  # Blank line = end of molecule

Parameter Guidance

ParameterTypical valueNotes
MethodB3LYP, PBE0, M06-2X, wB97XDHybrid DFT for molecules
Basis6-31G(d), 6-311+G(d,p), def2-TZVPPople or Karlsruhe basis sets
%mem4-64 GBGaussian stores integrals in memory
%nproc8-32Shared-memory parallel
DispersionEmpiricalDispersion=GD3BJAdd for non-covalent interactions
intUltraFineIntegration grid; always use for DFT
scfTightSCF convergence; XTight for frequencies

Common Calculation Types

KeywordPurpose
optGeometry optimization
freqVibrational frequencies (must be at a stationary point)
opt freqOptimize then frequencies in one job
opt=(ts,calcfc,noeigen)Transition state search
opt=(qst2)TS search from reactant+product geometries
irc=(calcfc,maxpoints=50)Intrinsic reaction coordinate
td=(nstates=10)TD-DFT excited states
nmrNMR chemical shifts
pop=nboNatural bond orbital analysis
Show full SKILL.md (128 more words)Show less

Solvent Effects

Add implicit solvation:

# opt freq b3lyp/6-311+g(d,p) scrf=(smd,solvent=water)

Common Pitfalls

  1. Missing blank lines — Gaussian input requires blank lines between sections and after coordinates. Missing them causes cryptic errors.
  2. Wrong multiplicity — open-shell systems need correct spin (2S+1). Doublet radicals: multiplicity=2.
  3. %mem too low — Gaussian crashes with "galloc: could not allocate memory". Set %mem to ~80% of available RAM.
  4. Basis set not available — not all basis sets cover all elements. Heavy elements need ECP (e.g., LANL2DZ).
  5. Frequencies at non-stationary point — freq requires a fully optimized geometry. Run opt freq together.
  6. License restrictions — never share Gaussian binaries. Ensure the HPC has a valid site license.
  7. Checkpoint file not saved — always use %chk for restart capability and property extraction
  8. Forgetting dispersion — B3LYP without GD3/GD3BJ underestimates non-covalent interactions

© Hello-QM, AGPL-3.0. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

Just SKILL.md in .claude/skills/gaussian of Hello-QM/catgo-LRG.

Open the folder on GitHubat commit fd6291b

Compare with similar skills

Gaussian next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

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Content Research Writerweapp-tailwindcss/weapp-tailwindcss1.9k25 repos~3.5kAutomated safety check: PassMIT
Peer Reviewspacering-net/codeg3.9k17 repos~5.9kAutomated safety check: NotesMIT

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Questions about Gaussian

What does Gaussian do?

Generate and manage Gaussian calculations. An agent skill from Hello-QM/catgo-LRG. Gaussian is an agent skill from Hello-QM/catgo-LRG. Generate and manage Gaussian calculations.

When should I use Gaussian?

Gaussian fits situations like: the user requests Gaussian; needs hybrid functionals (B3LYP); molecular quantum chemistry with Gaussian basis sets.

How do I install Gaussian in Claude Code?

Run `npx skills add Hello-QM/catgo-LRG --skill gaussian -a claude-code`. Or copy the skill folder (.claude/skills/gaussian in Hello-QM/catgo-LRG) into .claude/skills/gaussian in your project. Claude Code loads it when a task matches its description.

How do I install Gaussian in Codex?

Run `npx skills add Hello-QM/catgo-LRG --skill gaussian -a codex`. Or copy the skill folder (.claude/skills/gaussian in Hello-QM/catgo-LRG) into .agents/skills/gaussian in your project. Codex loads it when a task matches its description.

Can I use Gaussian in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add Hello-QM/catgo-LRG --skill gaussian -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/gaussian, .gemini/skills/gaussian, .github/skills/gaussian and .opencode/skills/gaussian in your project.

What does Gaussian need to run?

SKILL.md names no scripts, command-line tools or credentials: Gaussian is instructions for the agent only. Compatibility (from SKILL.md): Requires a valid Gaussian license and installation on the HPC target. Gaussian is commercial software — never distribute binaries or bypass license checks. .

Does Gaussian access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Gaussian safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Gaussian use?

Gaussian is published under the AGPL-3.0 licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Gaussian use?

About 1.2k tokens (SKILL.md is roughly 4.7k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Gaussian?

Skills that share tags, products or a category with Gaussian: Hypothesis Generation (spacering-net/codeg, 3.9k stars), GitHub Deep Research (bytedance/deer-flow, 84k stars), Nature Paper Card (Yuan1z0825/nature-skills, 47k stars) and Content Research Writer (weapp-tailwindcss/weapp-tailwindcss, 1.9k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Gaussian?

Hello-QM (a GitHub user) maintains it in Hello-QM/catgo-LRG, which has 205 GitHub stars. The repository holds 75 skills in this directory. The repository was last updated on September 22, 2026.

Source: Hello-QM/catgo-LRG on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.