Hypothesis Generation
spacering-net/codeg
Structured hypothesis formulation from observations. An agent skill from spacering-net/codeg.
A skill your agent uses when deciding which cc- sub-skill to invoke next, or when sequencing a Cancer Cell (Cell Press) manuscript from scope check through peer-review revision.
Install Cc Workflow
$ npx skills add franklee16/academic-research-skills --skill cc-workflow -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install franklee16/academic-research-skills cc-workflow --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/franklee16/academic-research-skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow .claude/skills/cc-workflow && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "cc-workflow" agent skill from https://github.com/franklee16/academic-research-skills/tree/master/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow into .claude/skills/cc-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cc-workflow", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/franklee16/academic-research-skills/tree/master/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflowType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add franklee16/academic-research-skills --skill cc-workflow -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install franklee16/academic-research-skills cc-workflow --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/franklee16/academic-research-skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow .agents/skills/cc-workflow && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "cc-workflow" agent skill from https://github.com/franklee16/academic-research-skills/tree/master/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow into .agents/skills/cc-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cc-workflow", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add franklee16/academic-research-skills --skill cc-workflow -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install franklee16/academic-research-skills cc-workflow --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/franklee16/academic-research-skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow .cursor/skills/cc-workflow && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "cc-workflow" agent skill from https://github.com/franklee16/academic-research-skills/tree/master/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow into .cursor/skills/cc-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cc-workflow", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/franklee16/academic-research-skills.git --path Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add franklee16/academic-research-skills --skill cc-workflow -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install franklee16/academic-research-skills cc-workflow --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/franklee16/academic-research-skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow .gemini/skills/cc-workflow && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "cc-workflow" agent skill from https://github.com/franklee16/academic-research-skills/tree/master/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow into .gemini/skills/cc-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cc-workflow", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install franklee16/academic-research-skills cc-workflowInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add franklee16/academic-research-skills --skill cc-workflow -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/franklee16/academic-research-skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow .github/skills/cc-workflow && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "cc-workflow" agent skill from https://github.com/franklee16/academic-research-skills/tree/master/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow into .github/skills/cc-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cc-workflow", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add franklee16/academic-research-skills --skill cc-workflow -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install franklee16/academic-research-skills cc-workflow --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/franklee16/academic-research-skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow .opencode/skills/cc-workflow && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "cc-workflow" agent skill from https://github.com/franklee16/academic-research-skills/tree/master/Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow into .opencode/skills/cc-workflow/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "cc-workflow", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
cc-workflow- GitHub stars
- 223
- Used in
- 1 other repo
- Token cost
- ~1.2k tokens
- SKILL.md length
- 505 words
- Files
- 1
- Skills in repo
- 1,616
- Repo updated
- First seen
- Licence
- None found
At a glance
A skill your agent uses when deciding which cc- sub-skill to invoke next, or when sequencing a Cancer Cell (Cell Press) manuscript from scope check through peer-review revision.
- Works in 11 steps: cc-scope-fit — confirm mechanism +… → cc-study-design — design / audit… → cc-reporting-standards — STAR Methods,… → …
- Deciding which cc- sub-skill to invoke next
- SKILL.md covers Overview, When to trigger, Routing table and Default order, plus 3 more sections
- Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
What it does
Cc Workflow is an agent skill from franklee16/academic-research-skills. Use when deciding which cc- sub-skill to invoke next, or when sequencing a Cancer Cell (Cell Press) manuscript from scope check through peer-review revision. Routes — it does not replace — the specialized skills.
Its SKILL.md is about 1.2k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science. The repository describes itself as: Comprehensive collection of Claude Code skills for academic research in economics, finance, and social sciences.
When your agent uses it
- Deciding which cc- sub-skill to invoke next
- Sequencing a Cancer Cell (Cell Press) manuscript from scope check through peer-review revision
Example prompts
- “/cc-workflow”
Workflow steps
11 steps, taken from the first numbered list in SKILL.md.
- cc-scope-fit — confirm mechanism + translational relevance before investing more
- cc-study-design — design / audit orthogonal validation, controls, replicates, in vivo rigor
- cc-reporting-standards — STAR Methods, Key Resources Table, authentication, RRIDs
- cc-statistics — define n, pick tests, correct for multiplicity, label error bars
- cc-figures-tables — multi-panel mechanistic figures with quantification + image integrity
- cc-structured-abstract — Summary, Highlights, eTOC blurb, graphical abstract
- cc-ethics-registration — approvals, consent, biosafety, data-deposition statements
- cc-writing-style — Cell Press prose and claim calibration (polish stage)
- cc-cover-letter — significance / fit / suggested reviewers
- cc-submission — pre-submission preflight
- cc-peer-review-revision — after reviewer reports
What it can do on your machine
Read from SKILL.md and the folder at commit 9a4b2db. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Cc Workflow loads about 1.2k tokens when it runs. Until then it costs about 56 tokens; SKILL.md has 505 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
Without a licence we can't republish the file, so here is its outline and opening line. It has 505 words (~1,208 tokens).
“This is the router. It does not replace any specialized skill — it tells you which cc-* skill to use at your current stage of a Cancer Cell (Cell Press) molecular / translational oncology manuscript.”
- name
- cc-workflow
Files
Just SKILL.md in Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow of franklee16/academic-research-skills.
Open the folder on GitHubat commit 9a4b2db
Used in 1 other repository
We found 1 copy of this SKILL.md (exact, near-identical or edited) in other folders, from 1 other GitHub owner. This page covers the copy in franklee16/academic-research-skills, which our catalogue first saw on October 7, 2026.
Compare with similar skills
Cc Workflow next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Cc Workflow this skillfranklee16/academic-research-skills | 223 | 1 repos | ~1.2k | Automated safety check: Pass | None | |
| Hypothesis Generationspacering-net/codeg | 3.8k | 15 repos | ~3.6k | Automated safety check: Notes | MIT | |
| GitHub Deep Researchbytedance/deer-flow | 83k | 5 repos | ~1.3k | Automated safety check: Pass | MIT | |
| Nature Paper CardYuan1z0825/nature-skills | 46k | 2 repos | ~2.1k | Automated safety check: Pass | Apache-2.0 | |
| Read arXiv Paperkarpathy/nanochat | 58k | 2 repos | ~494 | Automated safety check: Pass | MIT | |
| Content Research Writerweapp-tailwindcss/weapp-tailwindcss | 1.9k | 25 repos | ~3.5k | Automated safety check: Pass | MIT |
Similar skills
GitHub Deep Research
bytedance/deer-flow
Researches a GitHub repository over four rounds using the GitHub API and web search, then writes a structured markdown report with timeline, metrics and Mermaid diagrams.
Nature Paper Card
Yuan1z0825/nature-skills
Builds a structured deep-reading card for one scientific paper, covering methods, how experiments support claims, limitations and research ideas, with a script to prepare the source.
Read arXiv Paper
karpathy/nanochat
Fetches the TeX source of an arXiv paper from its URL, reads it and writes a markdown summary tied to the nanochat project.
Content Research Writer
weapp-tailwindcss/weapp-tailwindcss
Assists in writing high-quality content by conducting research, adding citations, improving hooks, iterating on outlines, and providing real-time feedback on each section.
Peer Review
spacering-net/codeg
Structured manuscript/grant review with checklist-based evaluation.
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Related
Categories
Questions about Cc Workflow
What does Cc Workflow do?
A skill your agent uses when deciding which cc- sub-skill to invoke next, or when sequencing a Cancer Cell (Cell Press) manuscript from scope check through peer-review revision. Cc Workflow is an agent skill from franklee16/academic-research-skills. Use when deciding which cc- sub-skill to invoke next, or when sequencing a Cancer Cell (Cell Press) manuscript from scope check through peer-review revision.
When should I use Cc Workflow?
Cc Workflow fits situations like: deciding which cc- sub-skill to invoke next; sequencing a Cancer Cell (Cell Press) manuscript from scope check through peer-review revision.
How do I install Cc Workflow in Claude Code?
Run `npx skills add franklee16/academic-research-skills --skill cc-workflow -a claude-code`. Or copy the skill folder (Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow in franklee16/academic-research-skills) into .claude/skills/cc-workflow in your project. Claude Code loads it when a task matches its description.
How do I install Cc Workflow in Codex?
Run `npx skills add franklee16/academic-research-skills --skill cc-workflow -a codex`. Or copy the skill folder (Awesome-Journal-Skills-main/Cancer-Cell-Skills/skills/cc-workflow in franklee16/academic-research-skills) into .agents/skills/cc-workflow in your project. Codex loads it when a task matches its description.
Can I use Cc Workflow in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add franklee16/academic-research-skills --skill cc-workflow -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/cc-workflow, .gemini/skills/cc-workflow, .github/skills/cc-workflow and .opencode/skills/cc-workflow in your project.
What does Cc Workflow need to run?
SKILL.md names no scripts, command-line tools or credentials: Cc Workflow is instructions for the agent only.
Does Cc Workflow access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Cc Workflow safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Cc Workflow use?
No licence was found for Cc Workflow or its repository. Without one, default copyright applies: ask the author before reusing or redistributing it.
How many tokens does Cc Workflow use?
About 1.2k tokens (SKILL.md is roughly 4.8k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Cc Workflow?
Skills that share tags, products or a category with Cc Workflow: Hypothesis Generation (spacering-net/codeg, 3.8k stars), GitHub Deep Research (bytedance/deer-flow, 83k stars), Nature Paper Card (Yuan1z0825/nature-skills, 46k stars) and Read arXiv Paper (karpathy/nanochat, 58k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Cc Workflow?
franklee16 (a GitHub user) maintains it in franklee16/academic-research-skills, which has 223 GitHub stars. The repository holds 1,616 skills in this directory. The repository was last updated on September 18, 2026.
Source: franklee16/academic-research-skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.