Scientific Critical Thinking
weapp-tailwindcss/weapp-tailwindcss
Evaluate research rigor. An agent skill from weapp-tailwindcss/weapp-tailwindcss.
Design empirical studies through power analysis, pre-analysis planning, QSF parsing, and survey architecture.
$ npx skills add flonat/flonat-research --skill experiment-design -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install flonat/flonat-research experiment-design --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/flonat/flonat-research.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/experiment-design .claude/skills/experiment-design && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "experiment-design" agent skill from https://github.com/flonat/flonat-research/tree/main/skills/experiment-design into .claude/skills/experiment-design/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "experiment-design", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/flonat/flonat-research/tree/main/skills/experiment-designType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add flonat/flonat-research --skill experiment-design -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install flonat/flonat-research experiment-design --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/flonat/flonat-research.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/experiment-design .agents/skills/experiment-design && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "experiment-design" agent skill from https://github.com/flonat/flonat-research/tree/main/skills/experiment-design into .agents/skills/experiment-design/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "experiment-design", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add flonat/flonat-research --skill experiment-design -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install flonat/flonat-research experiment-design --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/flonat/flonat-research.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/experiment-design .cursor/skills/experiment-design && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "experiment-design" agent skill from https://github.com/flonat/flonat-research/tree/main/skills/experiment-design into .cursor/skills/experiment-design/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "experiment-design", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/flonat/flonat-research.git --path skills/experiment-design--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add flonat/flonat-research --skill experiment-design -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install flonat/flonat-research experiment-design --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/flonat/flonat-research.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/experiment-design .gemini/skills/experiment-design && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "experiment-design" agent skill from https://github.com/flonat/flonat-research/tree/main/skills/experiment-design into .gemini/skills/experiment-design/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "experiment-design", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install flonat/flonat-research experiment-designInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add flonat/flonat-research --skill experiment-design -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/flonat/flonat-research.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/experiment-design .github/skills/experiment-design && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "experiment-design" agent skill from https://github.com/flonat/flonat-research/tree/main/skills/experiment-design into .github/skills/experiment-design/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "experiment-design", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add flonat/flonat-research --skill experiment-design -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install flonat/flonat-research experiment-design --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/flonat/flonat-research.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/experiment-design .opencode/skills/experiment-design && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "experiment-design" agent skill from https://github.com/flonat/flonat-research/tree/main/skills/experiment-design into .opencode/skills/experiment-design/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "experiment-design", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
experiment-designDesign empirical studies through power analysis, pre-analysis planning, QSF parsing, and survey architecture.
Experiment Design is an agent skill from flonat/flonat-research. Design empirical studies through power analysis, pre-analysis planning, QSF parsing, and survey architecture. Use when specifying sampling, measurement, treatment, or analysis before data collection. Not for causal identification alone; use $causal-design.
Its SKILL.md is about 2.3k tokens, which your agent loads only when the skill is triggered. The skill folder holds 7 other files, including reference files (for example `references/identification-strategies.md`, `references/known-scales-registry.md` and `references/pap-template.md`).
It sits in Research & Science, covering Experimental design. The repository describes itself as: Shareable Claude Code + Codex infrastructure for PhD researchers — skills, agents, hooks, and rules for academic workflows. The licence is MIT.
4 steps, taken from the first numbered list in SKILL.md.
Read from SKILL.md and the folder at commit da27600. It shows what the files ask for, not the result of running them.
Pre-approves these tools, so the agent can use them without asking each time:
Bash(uv*Rscript*R*mkdir*ls*)ReadWriteEditGlobGrep…and 1 more on the same allowed-tools line.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Experiment Design loads about 2.3k tokens when it runs, and up to ~9.2k if it reads all its reference files. Until then it costs about 69 tokens; SKILL.md has 973 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from flonat/flonat-research at commit da27600, republished under its MIT licence (© flonat). 973 words, ~2,292 tokens.
.claude/skills/experiment-design/SKILL.md (or your agent's skills folder). This skill also uses 6 other files; get the full folder from GitHub.Interview-driven design workflow producing design documents, power analysis scripts, and pre-analysis plans.
| Mode | What it produces | Entry point |
|---|---|---|
| Power | Power analysis script + sample size table | "How many participants do I need?" |
| Design | Full design document (hypotheses, conditions, measures, randomization) | "Design my experiment" |
| PAP | Pre-analysis plan (AEA/OSF/EGAP format) | "Write a PAP" |
| Survey | Structured survey specification from natural language or QSF | "Build a survey" / "Parse my Qualtrics" |
Default: Design. If user provides a .qsf file, auto-select Survey mode.
.qsf file to understand its structuredata-analysiscausal-designsynthetic-datashared/method-probing-questions.md — ask before designing (Experiments/RCTs, Survey sections)shared/validation-tiers.md — tier determines required power and pre-registrationshared/escalation-protocol.md — escalate when design has validity threatsshared/engagement-stratified-sampling.md — stratify social media samples by engagementshared/intercoder-reliability.md — reliability planning for content analysis designsRead references/power-analysis-recipes.md for language-specific code patterns.
DeclareDesign/pwr) or Python (statsmodels.stats.power)code/power_analysis.R (or .py), results to output/power_analysis_results.mdHPC escalation: If the power analysis uses Monte Carlo simulation (e.g., DeclareDesign with >10k replications, or a multi-design sweep), move execution to [HPC cluster] — drop the simulation script into hpc/ with templates/slurm/array.sbatch (array over seeds/designs). The SHA-logging snippet in the template pins results to the DGP version. See docs/guides/hpc.md.
If the user doesn't know the expected effect size, guide them:
| Source | How to use |
|---|---|
| Prior literature | "What did similar studies find?" |
| Pilot data | Calculate from pilot descriptives |
| SESOI | "What's the smallest effect worth detecting?" |
| Domain norms | Cohen's benchmarks as absolute last resort (small=0.2, medium=0.5, large=0.8 for d) |
Never default to Cohen's benchmarks without acknowledging they are arbitrary.
docs/experiment-design.md or project-appropriate locationMEMORY.md Estimand Registry (if project has one) or flag for the user to lock before analysisThis design document is what data-analysis Phase 3 checks for before allowing estimation.
Read references/pap-template.md for the full template structure.
docs/, log/plans/, or .context/docs/pre-analysis-plan.md (or .tex if user prefers LaTeX)Survey mode is a first-class capability with two entry points: QSF parsing and natural language construction.
When user provides a Qualtrics .qsf file:
references/qsf-parsing-guide.md for type mapping:references/known-scales-registry.md)When user describes an experiment in natural language:
references/survey-design-checklist.md)references/known-scales-registry.md for validated scales matching the constructsRead references/survey-design-checklist.md for the full checklist. Key checks:
| Resource | When read |
|---|---|
references/power-analysis-recipes.md | Power mode |
references/pap-template.md | PAP mode |
references/survey-design-checklist.md | Survey mode (quality checks) |
references/identification-strategies.md | Design mode (identification check) |
references/qsf-parsing-guide.md | Survey mode (QSF parsing) |
references/known-scales-registry.md | Survey mode (scale recognition) |
design-before-results rule | Design + PAP modes produce the locked design |
data-analysis skill | Consumes the design document |
causal-design skill | For observational identification (not experiments) |
synthetic-data skill | For generating pilot data |
© flonat, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
SKILL.md and 6 other files (references) in skills/experiment-design of flonat/flonat-research.
Open the folder on GitHubat commit da27600
Experiment Design next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Experiment Design this skillflonat/flonat-research | 146 | — | ~2.3k | Automated safety check: Pass | MIT | |
| Scientific Critical Thinkingweapp-tailwindcss/weapp-tailwindcss | 1.9k | 22 repos | ~5.9k | Automated safety check: Notes | MIT | |
| Benchmark Paper TemplateHKUSTDial/Supervisor-Skills | 8.7k | — | ~2.8k | Automated safety check: Pass | CC-BY-4.0 | |
| Claim-Driven Experiment PlannerzjYao36/Auto-Research-Refine | 128 | 6 repos | ~2.3k | Automated safety check: Notes | None | |
| Research Refine PipelinezjYao36/Auto-Research-Refine | 128 | 5 repos | ~1.4k | Automated safety check: Notes | None | |
| Metabolic Study Planneraiming-lab/AutoResearchClaw | 15k | — | ~1.9k | Automated safety check: Pass | MIT |
weapp-tailwindcss/weapp-tailwindcss
Evaluate research rigor. An agent skill from weapp-tailwindcss/weapp-tailwindcss.
HKUSTDial/Supervisor-Skills
Structures benchmark and evaluation papers around five pillars, with a completeness audit, an Introduction logic chain, a section skeleton and a pre-submission checklist.
zjYao36/Auto-Research-Refine
Turns a refined research proposal into a claim-to-evidence-to-run-order roadmap instead of a sprawling benchmark wishlist.
zjYao36/Auto-Research-Refine
Chains research-refine and experiment-plan to turn a vague research direction into a focused proposal and a claim-driven experiment roadmap.
aiming-lab/AutoResearchClaw
Turns a broad metabolic modelling topic into a concrete, paper-shaped plan with organism, model, perturbations, metrics and figures before any FBA code is written.
K-Dense-AI/scientific-agent-skills
Plans, runs, and documents analytical method validation, verification, or transfer studies under ICH Q2(R2)/Q14, USP, ICH M10, CLSI EP, or ISO/IEC 17025.
flonat/flonat-research
Create a large-format academic poster in LaTeX using beamerposter, tikzposter, or baposter.
flonat/flonat-research
Create, revise, and evaluate reusable AI workflow skills, including trigger-quality tests.
flonat/flonat-research
Create, read, edit, or convert Microsoft Word documents while preserving professional document structure.
flonat/flonat-research
Read, create, combine, split, rotate, OCR, watermark, secure, or extract content from PDF files.
flonat/flonat-research
Create or migrate project-level agents, repeatable project workflows, and planning state from one client-neutral contract, then render repository-scoped adapters for both Claude Code and Codex.
flonat/flonat-research
Deliver a fast pre-commit safety scan: file size, anonymity (author / affiliation strings in tex/bib), hardcoded secrets, and invisible-Unicode carriers.
Categories
Design empirical studies through power analysis, pre-analysis planning, QSF parsing, and survey architecture. Experiment Design is an agent skill from flonat/flonat-research. Design empirical studies through power analysis, pre-analysis planning, QSF parsing, and survey architecture.
Experiment Design fits situations like: specifying sampling; analysis before data collection.
Run `npx skills add flonat/flonat-research --skill experiment-design -a claude-code`. Or copy the skill folder (skills/experiment-design in flonat/flonat-research) into .claude/skills/experiment-design in your project. Claude Code loads it when a task matches its description.
Run `npx skills add flonat/flonat-research --skill experiment-design -a codex`. Or copy the skill folder (skills/experiment-design in flonat/flonat-research) into .agents/skills/experiment-design in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add flonat/flonat-research --skill experiment-design -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/experiment-design, .gemini/skills/experiment-design, .github/skills/experiment-design and .opencode/skills/experiment-design in your project.
SKILL.md names no scripts, command-line tools or credentials: Experiment Design is instructions for the agent only. Our summary lists: Python 3. Its frontmatter pre-approves these tools: Bash(uv*, Rscript*, R*, mkdir*, ls*), Read, Write, Edit, Glob, Grep, AskUserQuestion.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Experiment Design is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 2.3k tokens (SKILL.md is roughly 9.2k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 6.9k tokens, read only when the agent opens those files.
Skills that share tags, products or a category with Experiment Design: Scientific Critical Thinking (weapp-tailwindcss/weapp-tailwindcss, 1.9k stars), Benchmark Paper Template (HKUSTDial/Supervisor-Skills, 8.7k stars), Claim-Driven Experiment Planner (zjYao36/Auto-Research-Refine, 128 stars) and Research Refine Pipeline (zjYao36/Auto-Research-Refine, 128 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
flonat (a GitHub user) maintains it in flonat/flonat-research, which has 146 GitHub stars. The repository holds 83 skills in this directory. The repository was last updated on September 29, 2026.
Source: flonat/flonat-research on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.