Setup Arxiv MCP
NeoLabHQ/context-engineering-kit
Guide for setup arXiv paper search MCP server using Docker MCP
This skill should be used when user encounters "paper-search MCP error", "Docker not found", "Docker not running", "paper search not working", or needs help configuring paper search integration.
Install Setup
$ npx skills add fcakyon/claude-codex-settings --skill setup -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install fcakyon/claude-codex-settings setup --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/fcakyon/claude-codex-settings.git skills-src && mkdir -p .claude/skills && cp -r skills-src/plugins/paper-search-tools/skills/setup .claude/skills/setup && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "setup" agent skill from https://github.com/fcakyon/claude-codex-settings/tree/main/plugins/paper-search-tools/skills/setup into .claude/skills/setup/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "setup", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/fcakyon/claude-codex-settings/tree/main/plugins/paper-search-tools/skills/setupType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add fcakyon/claude-codex-settings --skill setup -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install fcakyon/claude-codex-settings setup --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/fcakyon/claude-codex-settings.git skills-src && mkdir -p .agents/skills && cp -r skills-src/plugins/paper-search-tools/skills/setup .agents/skills/setup && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "setup" agent skill from https://github.com/fcakyon/claude-codex-settings/tree/main/plugins/paper-search-tools/skills/setup into .agents/skills/setup/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "setup", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add fcakyon/claude-codex-settings --skill setup -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install fcakyon/claude-codex-settings setup --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/fcakyon/claude-codex-settings.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/plugins/paper-search-tools/skills/setup .cursor/skills/setup && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "setup" agent skill from https://github.com/fcakyon/claude-codex-settings/tree/main/plugins/paper-search-tools/skills/setup into .cursor/skills/setup/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "setup", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/fcakyon/claude-codex-settings.git --path plugins/paper-search-tools/skills/setup--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add fcakyon/claude-codex-settings --skill setup -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install fcakyon/claude-codex-settings setup --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/fcakyon/claude-codex-settings.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/plugins/paper-search-tools/skills/setup .gemini/skills/setup && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "setup" agent skill from https://github.com/fcakyon/claude-codex-settings/tree/main/plugins/paper-search-tools/skills/setup into .gemini/skills/setup/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "setup", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install fcakyon/claude-codex-settings setupInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add fcakyon/claude-codex-settings --skill setup -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/fcakyon/claude-codex-settings.git skills-src && mkdir -p .github/skills && cp -r skills-src/plugins/paper-search-tools/skills/setup .github/skills/setup && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "setup" agent skill from https://github.com/fcakyon/claude-codex-settings/tree/main/plugins/paper-search-tools/skills/setup into .github/skills/setup/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "setup", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add fcakyon/claude-codex-settings --skill setup -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install fcakyon/claude-codex-settings setup --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/fcakyon/claude-codex-settings.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/plugins/paper-search-tools/skills/setup .opencode/skills/setup && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "setup" agent skill from https://github.com/fcakyon/claude-codex-settings/tree/main/plugins/paper-search-tools/skills/setup into .opencode/skills/setup/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "setup", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
setup- GitHub stars
- 1.2k
- Token cost
- ~147 tokens
- SKILL.md length
- 46 words
- Files
- 1
- Skills in repo
- 43
- Repo updated
- First seen
- Licence
- Apache-2.0
At a glance
This skill should be used when user encounters "paper-search MCP error", "Docker not found", "Docker not running", "paper search not working", or needs help configuring paper search integration.
- Encounters paper-search MCP error
- SKILL.md covers Quick Fixes and Don't Need Paper Search?
- Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
- Docker not found
What it does
Setup is an agent skill from fcakyon/claude-codex-settings. This skill should be used when user encounters "paper-search MCP error", "Docker not found", "Docker not running", "paper search not working", or needs help configuring paper search integration.
Its SKILL.md is about 150 tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Research & Science, covering Academic paper search and Containers. It works with Docker and Model Context Protocol. The repository describes itself as: Battle-tested Claude Code, OpenAI Codex, Cursor configs, plugins, hooks and agents with Kimi, MiniMax and GLM API support. The licence is Apache-2.0.
When your agent uses it
- Encounters paper-search MCP error
- Docker not found
- Docker not running
- Paper search not working
Example prompts
- “paper-search MCP error”
- “Docker not found”
- “Docker not running”
- “/setup”
Requirements
- Docker
What it can do on your machine
Read from SKILL.md and the folder at commit 7a519d8. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
Runs code
No scripts in the folder and no shell commands in SKILL.md.
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Setup loads about 147 tokens when it runs. Until then it costs about 50 tokens; SKILL.md has 46 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check passed
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
The full file from fcakyon/claude-codex-settings at commit 7a519d8, republished under its Apache-2.0 licence (© fcakyon). 46 words, ~147 tokens.
Download SKILL.mdSave it as
.claude/skills/setup/SKILL.md (or your agent's skills folder).- name
- setup
- description
- This skill should be used when user encounters "paper-search MCP error", "Docker not found", "Docker not running", "paper search not working", or needs help configuring paper search integration.
Paper Search Tools Setup
Run /paper-search-tools:setup to configure Paper Search MCP.
Quick Fixes
- Docker not found - Install Docker (see setup command)
- Docker not running - Start Docker Desktop
- Connection failed - Restart Claude Code after Docker starts
Don't Need Paper Search?
Disable via /mcp command to prevent errors.
© fcakyon, Apache-2.0. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Files
Just SKILL.md in plugins/paper-search-tools/skills/setup of fcakyon/claude-codex-settings.
Open the folder on GitHubat commit 7a519d8
Compare with similar skills
Setup next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Setup this skillfcakyon/claude-codex-settings | 1.2k | — | ~147 | Automated safety check: Pass | Apache-2.0 | |
| Setup Arxiv MCPNeoLabHQ/context-engineering-kit | 1.7k | — | ~1k | Automated safety check: Pass | GPL-3.0 | |
| Cognee Docker Setuptopoteretes/cognee | 32k | 1 repos | ~901 | Automated safety check: Notes | Apache-2.0 | |
| Agent Readiness Auditdocker/docs | 4.7k | — | ~1.8k | Automated safety check: Pass | Apache-2.0 | |
| Frontend Build Timing Auditopenops-cloud/openops | 1.1k | — | ~2.3k | Automated safety check: Pass | Custom licence | |
| Unraiddinglebear-ai/unraid | 135 | — | ~5.4k | Automated safety check: Notes | MIT |
Similar skills
Cognee Docker Setup
topoteretes/cognee
Runs the Cognee AI memory platform in Docker, from a one-file prebuilt image to a full compose stack with UI, MCP server, Postgres and Neo4j.
- Official
Agent Readiness Audit
docker/docs
Audit a documentation site for agent-friendliness: discovery, markdown delivery, crawlability, semantic structure, machine-readable surfaces, and content legibility.
Frontend Build Timing Audit
openops-cloud/openops
Detects and diagnoses chunk-evaluation timing bugs in the Vite/rolldown production build of react-ui (works-in-dev / broken-in-build i18n regressions, missing UI labels, module-scope t()…
Unraid
dinglebear-ai/unraid
This skill should be used when the user mentions Unraid, asks to check server health, monitor array or disk status, list or restart Docker containers, start or stop VMs, read system logs, check…
Oneclickvirt
oneclickvirt/oneclickvirt
OneClickVirt operations skill for managing containers, virtual machines, provider nodes, health checks, and metrics through MCP.
More from fcakyon/claude-codex-settings
All 43 skills in this repoSlides
fcakyon/claude-codex-settings
Create and edit presentation slide decks (.pptx) with PptxGenJS, bundled layout helpers, and render/validation utilities.
Openobserve API
fcakyon/claude-codex-settings
This skill should be used when user asks to "query OpenObserve", "create OpenObserve dashboard", "edit OpenObserve panel", "fetch OpenObserve logs", "run OpenObserve search", "list OpenObserve…
Supabase JS
fcakyon/claude-codex-settings
This skill should be used when user asks to "use supabase-js", "query Supabase database", "supabase auth", "supabase storage", "supabase realtime", "supabase edge functions", or works with the…
Yolo Training
fcakyon/claude-codex-settings
This skill should be used when user asks to "improve my mAP", "why is my model overfitting", "my training is diverging", "read my results.csv", "interpret my training curves", "my AP50 is good but…
Dokploy Deploy
fcakyon/claude-codex-settings
This skill should be used when user asks to "deploy with Dokploy", "use Dokploy Cloud", "manage self-hosted Dokploy", "deploy Docker Compose on Dokploy", "manage Dokploy databases", "configure…
Openship Config
fcakyon/claude-codex-settings
This skill should be used when the user asks to "create openship.json", "configure an OpenShip deployment", "make a repo deployable on OpenShip", or fix "openship config validate" errors.
Related
Works with
Categories
Questions about Setup
What does Setup do?
This skill should be used when user encounters "paper-search MCP error", "Docker not found", "Docker not running", "paper search not working", or needs help configuring paper search integration. Setup is an agent skill from fcakyon/claude-codex-settings. This skill should be used when user encounters "paper-search MCP error", "Docker not found", "Docker not running", "paper search not working", or needs help configuring paper search integration.
When should I use Setup?
Setup fits situations like: encounters paper-search MCP error; Docker not found; Docker not running; paper search not working.
How do I install Setup in Claude Code?
Run `npx skills add fcakyon/claude-codex-settings --skill setup -a claude-code`. Or copy the skill folder (plugins/paper-search-tools/skills/setup in fcakyon/claude-codex-settings) into .claude/skills/setup in your project. Claude Code loads it when a task matches its description.
How do I install Setup in Codex?
Run `npx skills add fcakyon/claude-codex-settings --skill setup -a codex`. Or copy the skill folder (plugins/paper-search-tools/skills/setup in fcakyon/claude-codex-settings) into .agents/skills/setup in your project. Codex loads it when a task matches its description.
Can I use Setup in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add fcakyon/claude-codex-settings --skill setup -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/setup, .gemini/skills/setup, .github/skills/setup and .opencode/skills/setup in your project.
What does Setup need to run?
SKILL.md names no scripts, command-line tools or credentials: Setup is instructions for the agent only. Our summary lists: Docker.
Does Setup access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Setup safe to install?
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
What licence does Setup use?
Setup is published under the Apache-2.0 licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
How many tokens does Setup use?
About 147 tokens (SKILL.md is roughly 588 characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Setup?
Skills that share tags, products or a category with Setup: Setup Arxiv MCP (NeoLabHQ/context-engineering-kit, 1.7k stars), Cognee Docker Setup (topoteretes/cognee, 32k stars), Agent Readiness Audit (docker/docs, 4.7k stars) and Frontend Build Timing Audit (openops-cloud/openops, 1.1k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Setup?
fcakyon (a GitHub user) maintains it in fcakyon/claude-codex-settings, which has 1,165 GitHub stars. The repository holds 43 skills in this directory. The repository was last updated on October 7, 2026.
Source: fcakyon/claude-codex-settings on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.