Gsd Phase
open-gsd/gsd-core
Multi-phase management — add, insert, remove, or edit phases in ROADMAP.md (roadmap phase CRUD)
Plan the work before you edit — its phases, the model and effort each takes, and whether it is worth a plan file with a ledger beside it.
$ npx skills add epam/cloud-pipeline --skill plan-change -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install epam/cloud-pipeline plan-change --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/epam/cloud-pipeline.git skills-src && mkdir -p .claude/skills && cp -r skills-src/.agents/skills/plan-change .claude/skills/plan-change && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "plan-change" agent skill from https://github.com/epam/cloud-pipeline/tree/develop/.agents/skills/plan-change into .claude/skills/plan-change/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "plan-change", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/epam/cloud-pipeline/tree/develop/.agents/skills/plan-changeType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add epam/cloud-pipeline --skill plan-change -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install epam/cloud-pipeline plan-change --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/epam/cloud-pipeline.git skills-src && mkdir -p .agents/skills && cp -r skills-src/.agents/skills/plan-change .agents/skills/plan-change && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "plan-change" agent skill from https://github.com/epam/cloud-pipeline/tree/develop/.agents/skills/plan-change into .agents/skills/plan-change/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "plan-change", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add epam/cloud-pipeline --skill plan-change -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install epam/cloud-pipeline plan-change --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/epam/cloud-pipeline.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/.agents/skills/plan-change .cursor/skills/plan-change && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "plan-change" agent skill from https://github.com/epam/cloud-pipeline/tree/develop/.agents/skills/plan-change into .cursor/skills/plan-change/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "plan-change", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/epam/cloud-pipeline.git --path .agents/skills/plan-change--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add epam/cloud-pipeline --skill plan-change -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install epam/cloud-pipeline plan-change --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/epam/cloud-pipeline.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/.agents/skills/plan-change .gemini/skills/plan-change && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "plan-change" agent skill from https://github.com/epam/cloud-pipeline/tree/develop/.agents/skills/plan-change into .gemini/skills/plan-change/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "plan-change", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install epam/cloud-pipeline plan-changeInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add epam/cloud-pipeline --skill plan-change -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/epam/cloud-pipeline.git skills-src && mkdir -p .github/skills && cp -r skills-src/.agents/skills/plan-change .github/skills/plan-change && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "plan-change" agent skill from https://github.com/epam/cloud-pipeline/tree/develop/.agents/skills/plan-change into .github/skills/plan-change/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "plan-change", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add epam/cloud-pipeline --skill plan-change -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install epam/cloud-pipeline plan-change --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/epam/cloud-pipeline.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/.agents/skills/plan-change .opencode/skills/plan-change && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "plan-change" agent skill from https://github.com/epam/cloud-pipeline/tree/develop/.agents/skills/plan-change into .opencode/skills/plan-change/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "plan-change", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
plan-changePlan the work before you edit — its phases, the model and effort each takes, and whether it is worth a plan file with a ledger beside it.
Plan Change is an agent skill from epam/cloud-pipeline. Plan the work before you edit — its phases, the model and effort each takes, and whether it is worth a plan file with a ledger beside it. Also when resuming a plan, or told to continue one.
Its SKILL.md is about 1.4k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
The repository describes itself as: Cloud agnostic genomics analysis, scientific computation and storage platform. The licence is Apache-2.0.
Read from SKILL.md and the folder at commit 5017688. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md (its code samples are yaml and markdown).
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Plan Change loads about 1.4k tokens when it runs. Until then it costs about 50 tokens; SKILL.md has 721 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from epam/cloud-pipeline at commit 5017688, republished under its Apache-2.0 licence (© epam). 721 words, ~1,447 tokens.
.claude/skills/plan-change/SKILL.md (or your agent's skills folder).A plan is two files: the plan, and a ledger beside it recording what actually happened. Most tasks need neither — state the plan, get a yes, start editing; nothing goes to disk. Write the files whenever you are asked, and when the work spans more than one session, branch or pull request. Resuming beats re-deriving, so look first: the prompt normally names the plan, and on a bare "implement the plan" search both directories below, asking which if several match.
| Path | Tracked |
|---|---|
.agents/plans.local/<key>/<slug>.md, its <slug>.ledger.md beside it | no — the default |
.agents/plans/<key>/<slug>.md, its <slug>.ledger.md beside it | yes — once shared |
<key> is whatever identifies the work — issue_<n>, the branch name (its / nests as a path), or a
short feature slug — and it is a directory, not a filename: one key can carry several plans, each
with its own ledger. Share one — move both files into .agents/plans/ — when it outlives the
branch or someone else must read it; attended, ask first. Unattended, leave it local: the
plan goes in the pull request body. Never retire a shared plan on your own initiative; a merged pull
request does not mean the issue is done.
Frontmatter, then phases, in order. The body is otherwise whatever the change needs.
---
issue: 4538 # or `none`, with why in the body
branch: issue_4538/restore_storage_prompt_gui # exact, per CONTRIBUTIONS.md
base: develop-agentic @ 7b2cc2ccce # `tbd` until Workspace establishes it
area: gui # say in the body which phases leave it
author: Cloud Pipeline Agent
model: <model> # the one writing the plan; the ledger records what ran
cadence: checkpoint # continue · checkpoint · delegated — see below
location: local
---All eight are required of a plan you write — tbd and none are answers, a missing key is not.
A plan a person wrote owes none of this: read it as it is, and never restructure it to fit.
Each phase opens by advising a role and effort — implementer · medium — mechanical, one file per test target. Advice, not a decision. Effort is one of low, medium, high, xhigh, max.
Record the model that actually ran in the ledger, not here.
Amend the plan in place when a decision makes a later phase's text wrong, and say so in the ledger: the plan stays the thing you can execute, the ledger stays why it changed. The plan holds what you assumed while planning; the ledger holds what working proved.
How it gets executed is part of it, so ask while writing it, attended, and record the answer in
cadence:. Every mode is one commit per phase, plus the ledger's own commit last.
cadence: | |
|---|---|
continue | the phases run back to back, no stop between them |
checkpoint | after each phase, report and stop, ending with a one-line prompt to resume: continue <plan path> phase <n> |
delegated | one sub-agent per phase, launched one at a time, each on a fresh context; no stop |
Unattended — the implement-task skill defines when — use delegated where this session can
launch a fresh agent per phase, otherwise continue. A delegated sub-agent gets the plan's path and
its phase number and nothing else, since
the plan is the brief; it takes the phase through Verify and makes its code commit, and the
supervisor writes the ledger row and commits it.
Nothing in the diff refers to the plan — no code comment, commit message, doc line or release note
naming a plan file, a phase, or a plan's numbering. A local plan is gitignored and the code's readers
never see either one, so write the reason itself (// storage IDs are stable across a restore), never
where it was decided (// per phase 2 of restore-prompt.md).
| Phase | Name | Status | Model / effort | Commit | Notes |
|---|---|---|---|---|---|
| 1 | schema | done | <model> · medium | a1b2c3d | |
| 2 | service and DAO | in progress | <model> · high | | split from phase 1 |One per plan, and every phase gets its row when the ledger is created — pending, with Model /
effort carrying the effort the phase advised, and the model filled in once the phase has run. Status
is pending, in progress, done or blocked. Commit is empty until the phase has one, then
its SHA (the last, where a phase took several) and/or a #<n> pull request reference; the row
lands as its own commit, last in the phase. Notes is a phrase, usually empty.
Below the table, one line each for what a reader would otherwise guess — the set is open:
assumption · storage IDs are stable across restore, per issue comment 4538#12
decision · base is the current HEAD, agreed attended at Workspace
deviation · used the existing modal, not a new page — see a1b2c3d
skip · npm absent, client lint not run
blocked · client lint crashes on pre-existing code; each file this diff touches linted individuallyOne line per note, never a paragraph, and the whole file stays short. Record where the work stopped
and what a resumer could not work out alone, never what was done — point at the commits for that, and a
note that will not fit on one line belongs in a commit message. A check that passed needs no line —
done claims it; one that failed needs its skip or blocked line even where the phase is otherwise
complete.
© epam, Apache-2.0. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Just SKILL.md in .agents/skills/plan-change of epam/cloud-pipeline.
Open the folder on GitHubat commit 5017688
Plan Change next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Plan Change this skillepam/cloud-pipeline | 162 | — | ~1.4k | Automated safety check: Pass | Apache-2.0 | |
| Gsd Phaseopen-gsd/gsd-core | 10k | 1 repos | ~603 | Automated safety check: Notes | MIT | |
| Bio Phasing Imputation Haplotype PhasingGPTomics/bioSkills | 1.2k | 1 repos | ~4.2k | Automated safety check: Pass | MIT | |
| Gsd Execute Phaseopen-gsd/gsd-core | 10k | 1 repos | ~801 | Automated safety check: Notes | MIT | |
| Gsd Spec Phaseopen-gsd/gsd-core | 10k | 1 repos | ~658 | Automated safety check: Notes | MIT | |
| Gsd Mvp Phaseopen-gsd/gsd-core | 10k | 1 repos | ~505 | Automated safety check: Notes | MIT |
open-gsd/gsd-core
Multi-phase management — add, insert, remove, or edit phases in ROADMAP.md (roadmap phase CRUD)
GPTomics/bioSkills
Estimates haplotype phase from population linkage disequilibrium with SHAPEIT5, SHAPEIT4, Eagle2, or Beagle - turning unphased genotypes (0/1) into phased haplotypes (0|1) for imputation input…
open-gsd/gsd-core
SDD phase execution — execute all plans in a phase with dependency-aware wave parallelization
open-gsd/gsd-core
Clarify WHAT a phase delivers with ambiguity scoring; produces a SPEC.md before discuss-phase.
open-gsd/gsd-core
Plan a phase as a vertical MVP slice — user story, SPIDR splitting, then plan-phase
majiayu000/claude-skill-registry
Phase genotypes into haplotypes using Beagle or SHAPEIT. An agent skill from majiayu000/claude-skill-registry.
epam/cloud-pipeline
Open a user-visible client/ change in a browser against a real Cloud Pipeline deployment.
epam/cloud-pipeline
Learn which toolchains and environments this workstation has and how to invoke them, or set them up when they are missing.
epam/cloud-pipeline
Required before you commit, push or open a pull request here, asked or not.
epam/cloud-pipeline
Required before adding or changing anything an agent reads — a convention in AGENTS.md, a procedure as a skill, a pattern-scoped rule.
epam/cloud-pipeline
Find and run the checks a change owes, from what it touches and what that can reach.
epam/cloud-pipeline
Start here before the first edit of any file — a one-liner and a docs change included.
Plan the work before you edit — its phases, the model and effort each takes, and whether it is worth a plan file with a ledger beside it. Plan Change is an agent skill from epam/cloud-pipeline. Plan the work before you edit — its phases, the model and effort each takes, and whether it is worth a plan file with a ledger beside it.
Run `npx skills add epam/cloud-pipeline --skill plan-change -a claude-code`. Or copy the skill folder (.agents/skills/plan-change in epam/cloud-pipeline) into .claude/skills/plan-change in your project. Claude Code loads it when a task matches its description.
Run `npx skills add epam/cloud-pipeline --skill plan-change -a codex`. Or copy the skill folder (.agents/skills/plan-change in epam/cloud-pipeline) into .agents/skills/plan-change in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add epam/cloud-pipeline --skill plan-change -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/plan-change, .gemini/skills/plan-change, .github/skills/plan-change and .opencode/skills/plan-change in your project.
SKILL.md names no scripts, command-line tools or credentials: Plan Change is instructions for the agent only.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Plan Change is published under the Apache-2.0 licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 1.4k tokens (SKILL.md is roughly 5.8k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Plan Change: Gsd Phase (open-gsd/gsd-core, 10k stars), Bio Phasing Imputation Haplotype Phasing (GPTomics/bioSkills, 1.2k stars), Gsd Execute Phase (open-gsd/gsd-core, 10k stars) and Gsd Spec Phase (open-gsd/gsd-core, 10k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
epam (a GitHub organization) maintains it in epam/cloud-pipeline, which has 162 GitHub stars. The repository holds 8 skills in this directory. The repository was last updated on October 6, 2026.
Source: epam/cloud-pipeline on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.