Agent skill

Dockstore Release

by dockstore in dockstore/dockstore

Cut a new tagged release of the dockstore/dockstore webservice (alpha/beta/rc/stable/hotfix), following the dockstore-deploy wiki's Hubflow + Maven CI-friendly-versions process.

Apache-2.0Auto-check passedDevOps & Cloud

Install Dockstore Release

skills CLI
$ npx skills add dockstore/dockstore --skill dockstore-release -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install dockstore/dockstore dockstore-release --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/dockstore/dockstore.git skills-src && mkdir -p .claude/skills && cp -r skills-src/.claude/skills/dockstore-release .claude/skills/dockstore-release && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
dockstore-release
GitHub stars
131
Token cost
~2k tokens
SKILL.md length
864 words
Files
1
Skills in repo
1
Repo updated
First seen
Licence
Apache-2.0

At a glance

Cut a new tagged release of the dockstore/dockstore webservice (alpha/beta/rc/stable/hotfix), following the dockstore-deploy wiki's Hubflow + Maven CI-friendly-versions process.

  • Works in 5 steps: Ask the two key questions → Reconnaissance before touching anything → Present the plan, then execute with… → …
  • Asked to release
  • SKILL.md covers Step 0 — Ask the two key…, Step 1 — Reconnaissance before…, Step 2 — Present the plan,… and Step 3 — Unstable release path…, plus 2 more sections
  • Calls git and gh; reaches github.com

What it does

Dockstore Release is an agent skill from dockstore/dockstore. Cut a new tagged release of the dockstore/dockstore webservice (alpha/beta/rc/stable/hotfix), following the dockstore-deploy wiki's Hubflow + Maven CI-friendly-versions process. Use when asked to release, tag, or cut a new Dockstore webservice version.

Its SKILL.md is about 2k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

It sits in DevOps & Cloud. It works with Docker, Nextflow and Git. The repository describes itself as: An app store for scientific workflows, tools, notebooks, and services. The licence is Apache-2.0.

When your agent uses it

  • Asked to release
  • Cut a new Dockstore webservice version

Example prompts

  • “/dockstore-release”

Requirements

  • Docker

Workflow steps

5 steps, taken from the step headings in SKILL.md.

  1. Ask the two key questions
  2. Reconnaissance before touching anything
  3. Present the plan, then execute with checkpoints
  4. Unstable release path (alpha/beta/rc)
  5. Stable release path (final X.Y.Z or hotfix)

What it can do on your machine

Read from SKILL.md and the folder at commit e73fa1c. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    Shell commands in SKILL.md call:

    • git
    • gh

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    Hosts in commands or code, which the agent is likely to contact:

    • github.com

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Dockstore Release loads about 2k tokens when it runs. Until then it costs about 68 tokens; SKILL.md has 864 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~68
When it runs · the whole SKILL.md, loaded when a task matches
~2k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from dockstore/dockstore at commit e73fa1c, republished under its Apache-2.0 licence (© dockstore). 864 words, ~1,979 tokens.

Download SKILL.mdSave it as .claude/skills/dockstore-release/SKILL.md (or your agent's skills folder).
name
dockstore-release
description
Cut a new tagged release of the dockstore/dockstore webservice (alpha/beta/rc/stable/hotfix), following the dockstore-deploy wiki's Hubflow + Maven CI-friendly-versions process. Use when asked to release, tag, or cut a new Dockstore webservice version.

Dockstore Release

Guides a webservice release for dockstore/dockstore, based on the dockstore-deploy wiki page "Dockstore Releases" (webservice / "Friendly CI versions and a GitHub Action" section), adjusted for what the team actually does in practice — see Notes / gotchas below for where practice diverges from the wiki text.

This process touches shared state (git tags, branches, Artifactory, quay.io images, and potentially master). Never run the build/tag/push/finish commands without showing the exact command first and getting explicit confirmation — treat this the same as any other hard-to-reverse, shared-state action.

Step 0 — Ask the two key questions

Ask up front, via AskUserQuestion:

  1. Tag name — the exact version to release, e.g. 1.21.0-alpha.6, 1.21.0-beta.0, 1.21.0, or a hotfix like 1.20.1.
  2. Unstable or stable?
    • Unstable: any alpha/beta/rc prerelease tag.
    • Stable: a final X.Y.Z tag (no prerelease suffix) or a hotfix release.
    • Don't infer this from the tag string alone — confirm explicitly, since it changes the entire back half of the process (see Step 3 vs Step 4).

If it's not obvious from context, also confirm whether this is a release (branched from develop) or a hotfix (branched from master).

Step 1 — Reconnaissance before touching anything

Before running any command, check and report findings to the user:

  • git status on the current checkout — must be clean before starting.
  • git fetch origin --tags, then confirm the target tag doesn't already exist (git tag -l "<tag>", gh release view <tag> --repo dockstore/dockstore). If it exists, stop and ask rather than overwriting/re-tagging.
  • Look for stale release/*/hotfix/* branches (local and origin/) that might collide with or be confused for the new branch. If any look abandoned, confirm with the user before deleting (git branch -d/-D, git push origin --delete) — don't delete unasked.
  • Read <revision>/<changelist> in the root pom.xml to sanity-check against the target version (normally sits at .0-SNAPSHOT on develop).

Step 2 — Present the plan, then execute with checkpoints

Show the full tailored command sequence (below, with the real tag substituted) before running anything. Then execute step by step:

  • Read-only checks (git status, log, tag/branch lookups) can run without asking each time.
  • Anything that mutates shared state — git hf release start/finish, the mvnw build, git commit, git tag, git push, branch deletion, drafting/publishing a GitHub Release — gets a confirmation checkpoint first. Batch tightly-coupled steps (e.g. commit+tag+push) into one confirmation once the diff has been shown, rather than asking before every single command.

Step 3 — Unstable release path (alpha/beta/rc)

git checkout develop && git pull        # or master, for a hotfix
git hf release start <tag>              # or: git hf hotfix start <tag>

./mvnw clean install -Dchangelist=<suffix> -DskipTests
git add dockstore-webservice/src/main/resources/openapi3/openapi.yaml **/generated/**/pom.xml
git commit -m "Update artifacts"
git tag <tag> -a -m "release process"
git push origin <tag>
git push origin release/<tag>

<suffix> is the changelist override that reproduces the tag, i.e. everything after <revision> in the version string — tag 1.21.0-alpha.5 (with <revision>1.21</revision>) means -Dchangelist=.0-alpha.5.

Before committing, verify the build only touched dockstore-webservice/src/main/resources/openapi3/openapi.yaml and each module's generated/src/main/resources/pom.xml — if anything else changed, stop and ask.

Then:

  • Watch the Deploy artifacts action run to completion: gh run list --repo dockstore/dockstore --workflow=deploy_artifacts.yml, then gh run view <run-id> --repo dockstore/dockstore. It publishes to OICR Artifactory and pushes a Docker image to quay.io/dockstore/dockstore-webservice.
  • Confirmed team practice: that's the whole release. Despite the wiki describing a "Reset version" commit + merge of the release branch back into develop, in practice this is skipped for unstable tags — leave release/<tag> as pushed, don't reset generated files, don't merge it anywhere, and don't draft a GitHub Release, unless the user explicitly asks for one of those. Never run git hf release finish for an unstable tag.
Show full SKILL.md (323 more words)Show less

Step 4 — Stable release path (final X.Y.Z or hotfix)

Higher stakes than Step 3: this reaches master and produces a public release. Confirm each stage explicitly — don't chain through to git hf release finish without a checkpoint.

git checkout develop && git pull        # or master, for a hotfix
git hf release start <tag>              # or: git hf hotfix start <tag>

./mvnw clean install -Dchangelist=<suffix> -DskipTests
git add dockstore-webservice/src/main/resources/openapi3/openapi.yaml **/generated/**/pom.xml
git commit -m "Update artifacts"
git tag <tag> -a -m "release process"
git push origin <tag>
git push origin release/<tag>

Wait for the Deploy artifacts action to pass, then reset generated files before merging back:

./mvnw clean install -DskipTests
git add dockstore-webservice/src/main/resources/openapi3/openapi.yaml dockstore-webservice/src/main/resources/swagger.yaml **/generated/**/pom.xml
git commit -m "Reset version"
git push

Finishing hubflow requires Dockstore GitHub admin / release-leads team membership:

git hf release finish <tag>
# or: git hf hotfix finish <tag>

This merges into both master and develop. Expect merge conflicts on the develop side — resolve in favor of develop's content (except take the incoming version bump), verify with a full ./mvnw clean install, then check https://github.com/dockstore/dockstore/compare/develop...master shows no pending diff. If conflicts are painful, the wiki's fallback (checkout the tag, diff against master, apply as a patch, commit directly to master) is documented as a last resort — surface it to the user rather than reaching for it unprompted.

Finally, draft the GitHub Release from the tag (confirm with the user before publishing, since this is a shared, externally-visible, hard-to-reverse action):

  • "Create release from tag" on GitHub, title = tag name.
  • Leave "This is a pre-release" checked, and don't mark it "latest", until it's confirmed live in dev/staging/prod.
  • Pick the correct "Previous tag" and click "Generate release notes".

Notes / gotchas learned from actual releases

  • Always use the wrapper (./mvnw), never system mvn, and always build the full reactor from repo root — never -pl/-am a subset — since generated pom.xml files and THIRD-PARTY-LICENSES.txt are derived from the complete module set.
  • <revision>/<changelist> in the root pom.xml normally stay at .0-SNAPSHOT on develop; the release version comes purely from the -Dchangelist=... build-time override, not from editing pom.xml directly.
  • Pushing directly to a release/* branch can bypass a "changes must be made through a pull request" branch-protection rule for admins — expected, but call it out when it happens rather than treating the bypass notice as an error.
  • Historically, unstable release/<tag> branches are left behind (never merged or deleted) — that's normal; don't clean up old ones proactively without asking first.

© dockstore, Apache-2.0. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

Just SKILL.md in .claude/skills/dockstore-release of dockstore/dockstore.

Open the folder on GitHubat commit e73fa1c

Compare with similar skills

Dockstore Release next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

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Reviewwerf/werf4.7k—~2kAutomated safety check: PassApache-2.0
Rtk Skillsopaco/deepwiki-rs3.1k—~1.4kAutomated safety check: PassMIT
Install CheckRLinf/RLinf5.5k—~2.3kAutomated safety check: PassApache-2.0

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Questions about Dockstore Release

What does Dockstore Release do?

Cut a new tagged release of the dockstore/dockstore webservice (alpha/beta/rc/stable/hotfix), following the dockstore-deploy wiki's Hubflow + Maven CI-friendly-versions process. Dockstore Release is an agent skill from dockstore/dockstore. Cut a new tagged release of the dockstore/dockstore webservice (alpha/beta/rc/stable/hotfix), following the dockstore-deploy wiki's Hubflow + Maven CI-friendly-versions process.

When should I use Dockstore Release?

Dockstore Release fits situations like: asked to release; cut a new Dockstore webservice version.

How do I install Dockstore Release in Claude Code?

Run `npx skills add dockstore/dockstore --skill dockstore-release -a claude-code`. Or copy the skill folder (.claude/skills/dockstore-release in dockstore/dockstore) into .claude/skills/dockstore-release in your project. Claude Code loads it when a task matches its description.

How do I install Dockstore Release in Codex?

Run `npx skills add dockstore/dockstore --skill dockstore-release -a codex`. Or copy the skill folder (.claude/skills/dockstore-release in dockstore/dockstore) into .agents/skills/dockstore-release in your project. Codex loads it when a task matches its description.

Can I use Dockstore Release in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add dockstore/dockstore --skill dockstore-release -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/dockstore-release, .gemini/skills/dockstore-release, .github/skills/dockstore-release and .opencode/skills/dockstore-release in your project.

What does Dockstore Release need to run?

Going by SKILL.md and its folder, Dockstore Release needs the command-line tools its instructions call (git and gh). Our summary lists: Docker.

Does Dockstore Release access the network?

SKILL.md names 1 domain. In commands or code: github.com; the agent is likely to contact it when it follows the instructions. This is read from the text; nothing was executed.

Is Dockstore Release safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Dockstore Release use?

Dockstore Release is published under the Apache-2.0 licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Dockstore Release use?

About 2k tokens (SKILL.md is roughly 7.9k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Dockstore Release?

Skills that share tags, products or a category with Dockstore Release: Ssh Skill (badseal/ssh-skill, 536 stars), Crabbox Quickstart (openclaw/crabbox, 1.5k stars), Review (werf/werf, 4.7k stars) and Rtk Skill (sopaco/deepwiki-rs, 3.1k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Dockstore Release?

dockstore (a GitHub organization) maintains it in dockstore/dockstore, which has 131 GitHub stars. The repository was last updated on October 5, 2026.

Source: dockstore/dockstore on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.