Quarto Authoring
quarto-dev/quarto-r
A skill your agent uses when the user is explicitly working with Quarto, .qmd files, quarto.yml, Quarto projects, or Quarto features such as callouts, cross-references, citations, Mermaid diagrams…
Run an adversarial mathematical-accuracy review of a Julia package's src/ and test/ directories, producing a dated markdown report plus concise, self-contained fix-prompt markdowns suitable for…
$ npx skills add CliMA/EnsembleKalmanProcesses.jl --skill math-auditor -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install CliMA/EnsembleKalmanProcesses.jl math-auditor --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/CliMA/EnsembleKalmanProcesses.jl.git skills-src && mkdir -p .claude/skills && cp -r skills-src/.claude/skills/math-auditor .claude/skills/math-auditor && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "math-auditor" agent skill from https://github.com/CliMA/EnsembleKalmanProcesses.jl/tree/main/.claude/skills/math-auditor into .claude/skills/math-auditor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "math-auditor", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/CliMA/EnsembleKalmanProcesses.jl/tree/main/.claude/skills/math-auditorType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add CliMA/EnsembleKalmanProcesses.jl --skill math-auditor -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install CliMA/EnsembleKalmanProcesses.jl math-auditor --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/CliMA/EnsembleKalmanProcesses.jl.git skills-src && mkdir -p .agents/skills && cp -r skills-src/.claude/skills/math-auditor .agents/skills/math-auditor && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "math-auditor" agent skill from https://github.com/CliMA/EnsembleKalmanProcesses.jl/tree/main/.claude/skills/math-auditor into .agents/skills/math-auditor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "math-auditor", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add CliMA/EnsembleKalmanProcesses.jl --skill math-auditor -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install CliMA/EnsembleKalmanProcesses.jl math-auditor --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/CliMA/EnsembleKalmanProcesses.jl.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/.claude/skills/math-auditor .cursor/skills/math-auditor && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "math-auditor" agent skill from https://github.com/CliMA/EnsembleKalmanProcesses.jl/tree/main/.claude/skills/math-auditor into .cursor/skills/math-auditor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "math-auditor", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/CliMA/EnsembleKalmanProcesses.jl.git --path .claude/skills/math-auditor--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add CliMA/EnsembleKalmanProcesses.jl --skill math-auditor -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install CliMA/EnsembleKalmanProcesses.jl math-auditor --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/CliMA/EnsembleKalmanProcesses.jl.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/.claude/skills/math-auditor .gemini/skills/math-auditor && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "math-auditor" agent skill from https://github.com/CliMA/EnsembleKalmanProcesses.jl/tree/main/.claude/skills/math-auditor into .gemini/skills/math-auditor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "math-auditor", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install CliMA/EnsembleKalmanProcesses.jl math-auditorInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add CliMA/EnsembleKalmanProcesses.jl --skill math-auditor -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/CliMA/EnsembleKalmanProcesses.jl.git skills-src && mkdir -p .github/skills && cp -r skills-src/.claude/skills/math-auditor .github/skills/math-auditor && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "math-auditor" agent skill from https://github.com/CliMA/EnsembleKalmanProcesses.jl/tree/main/.claude/skills/math-auditor into .github/skills/math-auditor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "math-auditor", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add CliMA/EnsembleKalmanProcesses.jl --skill math-auditor -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install CliMA/EnsembleKalmanProcesses.jl math-auditor --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/CliMA/EnsembleKalmanProcesses.jl.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/.claude/skills/math-auditor .opencode/skills/math-auditor && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "math-auditor" agent skill from https://github.com/CliMA/EnsembleKalmanProcesses.jl/tree/main/.claude/skills/math-auditor into .opencode/skills/math-auditor/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "math-auditor", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
math-auditorRun an adversarial mathematical-accuracy review of a Julia package's src/ and test/ directories, producing a dated markdown report plus concise, self-contained fix-prompt markdowns suitable for…
Math Auditor is an agent skill from CliMA/EnsembleKalmanProcesses.jl. Run an adversarial mathematical-accuracy review of a Julia package's src/ and test/ directories, producing a dated markdown report plus concise, self-contained fix-prompt markdowns suitable for handing to a smaller model (e.g. Sonnet) in a later session. Use this skill whenever the user asks for an adversarial review, a math audit, a full code review focused on mathematical/numerical correctness, a check of algorithmic consistency with the literature, or says things like "review the math in src/", "is the algebra…
Its SKILL.md is about 2.6k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Development, covering Markdown, Statistics and Code review. The repository describes itself as: Derivative-free parameter calibration and uncertainty quantification for expensive models using ensemble Kalman methods. The licence is Apache-2.0.
6 steps, taken from the step headings in SKILL.md.
Read from SKILL.md and the folder at commit d10e521. It shows what the files ask for, not the result of running them.
Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.
From allowed-tools in the SKILL.md frontmatter.
No scripts in the folder and no shell commands in SKILL.md (its code samples are markdown).
From the folder's file list and the shell code blocks in SKILL.md.
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Math Auditor loads about 2.6k tokens when it runs. Until then it costs about 199 tokens; SKILL.md has 1,174 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
The automated check found no risky patterns in SKILL.md.
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
The full file from CliMA/EnsembleKalmanProcesses.jl at commit d10e521, republished under its Apache-2.0 licence (© CliMA). 1,174 words, ~2,570 tokens.
.claude/skills/math-auditor/SKILL.md (or your agent's skills folder).Adversarial review of a scientific Julia package for mathematical accuracy and consistency — not software architecture (flag architecture only when it causes mathematical wrongness, e.g. mutation aliasing, accidental type demotion, or inconsistent conventions between modules).
The output is written for the package's own developers: findings must cite exact
file:line, state the correct mathematics, and give a concrete failure scenario.
A finding that can't survive an attempt at refutation doesn't ship.
Each reviewer's job is to break the code, not describe it. Concretely, hunt for:
N-1 vs N
normalization, factor-of-2 / sign errors, Cholesky L vs U, covariance vs
precision, whether noise is added in obs-space or transformed space —
especially inconsistencies between modules that must agree.Δt scaling in stochastic dynamics)? Are means/covariances
computed over the right dimension? Deterministic vs stochastic variants
actually equivalent in expectation?inv/\ on possibly-singular matrices,
loss of symmetry/PSD-ness, subtraction-based variance formulas, missing
regularization, sqrt of negative-by-roundoff eigenvalues.size() is a double
finding: the bug and the missing test.List src/*.jl and test/**/*.jl with line counts. Group into 4–8 review
units of roughly comparable size, pairing each source module with the tests
that exercise it. Group modules that share mathematical conventions together
(e.g. all Kalman-update variants in one or two units) so the reviewer can catch
cross-module inconsistencies.
Spawn one agent per unit, in a single message so they run concurrently. Each agent prompt must include:
file, line, severity (critical / major / minor / hygiene),
claim (one sentence), evidence (the code vs the correct math),
failure_scenario (concrete inputs → wrong output),
verified (numerical / inspection), and
suggested_fix (optional, a few lines).Tell agents explicitly:
verified: numerical. Numerically verified findings are
worth far more than inspection-only ones." (In one audit, the agents that ran
code delivered the critical finding pre-verified to 1e-16; the only refuted
claim of the run came from an inspection-only unit.)@warn, @error, and throw at the constructors and call sites of the
code path, not just the function you are reading — guards often live at
construction time."As each agent's report arrives, save its raw findings verbatim to a scratchpad file (one per unit). A full audit plus verification is long enough that context summarization mid-run can silently lose findings; the scratchpad files are the durable record the report is assembled from.
For each critical/major finding, attempt refutation before it enters the
report: re-read the cited lines yourself, re-derive the math, and check whether
a test or an upstream transformation already accounts for it (common false
positives: a transpose hidden in a helper, normalization done at construction
time, a convention documented elsewhere, a @warn at the constructor that the
reviewer never read — re-run the warn/throw grep yourself for any "silent"
claim). Prioritise findings tagged verified: inspection; numerically verified
ones usually need only a sanity re-read. Spawn skeptic agents for findings you
can't settle from the main context. Demote or drop findings that don't survive;
mark surviving ones CONFIRMED vs PLAUSIBLE (couldn't fully verify).
Then build a small conventions matrix from the unit reports before writing anything: rows = modules, columns = the conventions the units commented on (covariance normalization N vs N−1, Δt/noise-scale placement, order of regularization vs localization, RNG threading, rows-vs-columns). Any mismatched cell between modules that must agree is a finding candidate in itself — in practice the worst bugs are a scale factor applied to one block or module but not its sibling, and they only become visible side by side.
Create full-code-review/<YYYY-MM-DD>/ (date from date +%F, never from
memory). Write review.md:
# Adversarial Mathematical Review — <Package> (<date>)
## Scope and method <!-- files covered, units, verification policy -->
## Summary table <!-- ID | severity | verdict | file:line | one-line claim -->
## Critical findings <!-- full detail: evidence, math, failure scenario, fix sketch -->
## Major findings
## Minor findings & hygiene <!-- terser -->
## Cross-module consistency notes
## Test-coverage gaps <!-- where math is unpinned by tests -->
## What was checked and found sound <!-- credit where due; prevents re-auditing -->Findings get stable IDs used everywhere, including fix prompts: C1… critical,
M1… major, m1… minor, h1… hygiene; grouped-minor fix prompts get G1….
For each finding with an actionable fix (usually critical + major, plus grouped
minors), write full-code-review/<date>/fix-prompts/<ID>-<slug>.md. These are
consumed by a smaller model in a fresh session with no context, so each must
be self-contained:
# Fix <ID>: <one-line title>
**File**: `src/Foo.jl`, function `bar!`, around line NNN.
**Problem**: <2–4 sentences: what the code does vs what the math requires.
Include the incorrect snippet verbatim.>
**Required change**: <exact edit, or precise description with the correct formula>
**Do not**: <guardrails — e.g. "do not change the API", "do not touch other methods">
**Verify**: <the test to run or add, with the invariant it should pin>Keep each under ~40 lines. One finding per file; group only truly mechanical
repeats (e.g. the same typo pattern in five docstrings) into one prompt.
Quote enough of the offending snippet that the fixer can locate it by function
name + snippet — line numbers drift between the audit and the fix session, so
present them as hints, not anchors.
Also write fix-prompts/README.md listing prompts in recommended application
order (independent fixes first, same-file prompts sequenced, conflicting ones
flagged) and naming which fixes intentionally change numerical results — so
the fixer checks a failing loose regression test against the analytic reference
in the prompt before "fixing" the test.
Final message: lead with the headline (how many confirmed critical/major findings and the single worst one), then the report path, then a compact summary table. Do not paste the whole report into the chat.
@warn "... experimental ...") caps at minor
unless the warning itself is wrong — the trap isn't silent.After delivering the report, offer: "Would you like to improve the math-auditor skill itself using skill-creator? You can share suggestions, or I can analyse this run — finding quality, false-positive rate, fix-prompt usability — to refine the skill for next time."
© CliMA, Apache-2.0. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file
Just SKILL.md in .claude/skills/math-auditor of CliMA/EnsembleKalmanProcesses.jl.
Open the folder on GitHubat commit d10e521
Math Auditor next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Math Auditor this skillCliMA/EnsembleKalmanProcesses.jl | 127 | — | ~2.6k | Automated safety check: Pass | Apache-2.0 | |
| Quarto Authoringquarto-dev/quarto-r | 160 | 1 repos | ~1.9k | Automated safety check: Pass | MIT | |
| Markdown Mermaid WritingK-Dense-AI/scientific-agent-skills | 48k | 1 repos | ~4.2k | Automated safety check: Notes | Apache-2.0 | |
| Format Markdown Tablemaslennikov-ig/claude-code-orchestrator-kit | 259 | — | ~1k | Automated safety check: Pass | Custom licence | |
| Cc Structured Abstractfranklee16/academic-research-skills | 223 | 1 repos | ~921 | Automated safety check: Pass | None | |
| WooCommerce Markdown Guidelineswoocommerce/woocommerce | 11k | 1 repos | ~1.7k | Automated safety check: Pass | Custom licence |
quarto-dev/quarto-r
A skill your agent uses when the user is explicitly working with Quarto, .qmd files, quarto.yml, Quarto projects, or Quarto features such as callouts, cross-references, citations, Mermaid diagrams…
K-Dense-AI/scientific-agent-skills
Writes scientific Markdown documentation and Mermaid diagrams for workflows, relationships, timelines, and schemas.
maslennikov-ig/claude-code-orchestrator-kit
Generate well-formatted markdown tables from data with proper alignment and spacing.
franklee16/academic-research-skills
A skill your agent uses when writing the Cancer Cell (Cell Press) front matter — the Summary, eTOC blurb, Highlights, and graphical abstract.
woocommerce/woocommerce
Rules for writing and editing markdown in the WooCommerce repository, with the project's markdownlint settings for headings, lists and code blocks.
flet-dev/flet
A skill your agent uses when writing or reviewing Flet documentation, including Python docstrings (Google style, reST roles, admonitions), Markdown docs (cross-references, images, code examples)…
CliMA/EnsembleKalmanProcesses.jl
Scaffold and maintain a SLURM/HPC job-dependency tree for an EnsembleKalmanProcesses.jl (EKP) calibration pipeline.
CliMA/EnsembleKalmanProcesses.jl
Add concise Base.show and Base.summary methods to Julia types whose default REPL representation is unhelpful or overwhelming.
CliMA/EnsembleKalmanProcesses.jl
Add or normalise Julia docstrings on public symbols (exported types, functions, and constants) so the package's public API is fully self-documenting and the Documenter.jl docs build passes its…
CliMA/EnsembleKalmanProcesses.jl
Rewrite vague, delayed, or low-context Julia error messages into structured, actionable diagnostics.
Run an adversarial mathematical-accuracy review of a Julia package's src/ and test/ directories, producing a dated markdown report plus concise, self-contained fix-prompt markdowns suitable for…. jl.g.
Math Auditor fits situations like: the user asks for an adversarial review; A full code review focused on mathematical/numerical correctness; A check of algorithmic consistency with the literature; says things like review the math in src/.
Run `npx skills add CliMA/EnsembleKalmanProcesses.jl --skill math-auditor -a claude-code`. Or copy the skill folder (.claude/skills/math-auditor in CliMA/EnsembleKalmanProcesses.jl) into .claude/skills/math-auditor in your project. Claude Code loads it when a task matches its description.
Run `npx skills add CliMA/EnsembleKalmanProcesses.jl --skill math-auditor -a codex`. Or copy the skill folder (.claude/skills/math-auditor in CliMA/EnsembleKalmanProcesses.jl) into .agents/skills/math-auditor in your project. Codex loads it when a task matches its description.
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add CliMA/EnsembleKalmanProcesses.jl --skill math-auditor -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/math-auditor, .gemini/skills/math-auditor, .github/skills/math-auditor and .opencode/skills/math-auditor in your project.
SKILL.md names no scripts, command-line tools or credentials: Math Auditor is instructions for the agent only.
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.
Math Auditor is published under the Apache-2.0 licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.
About 2.6k tokens (SKILL.md is roughly 10k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
Skills that share tags, products or a category with Math Auditor: Quarto Authoring (quarto-dev/quarto-r, 160 stars), Markdown Mermaid Writing (K-Dense-AI/scientific-agent-skills, 48k stars), Format Markdown Table (maslennikov-ig/claude-code-orchestrator-kit, 259 stars) and Cc Structured Abstract (franklee16/academic-research-skills, 223 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
CliMA (a GitHub organization) maintains it in CliMA/EnsembleKalmanProcesses.jl, which has 127 GitHub stars. The repository holds 5 skills in this directory. The repository was last updated on October 7, 2026.
Source: CliMA/EnsembleKalmanProcesses.jl on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.