Research Writing
alfonso0512/research-writing-skill
科研论文写作助手，提供 30 个 Prompt 模板覆盖论文写作全流程. An agent skill from alfonso0512/research-writing-skill.
Orchestrate the complete post-first-draft polishing pipeline for an academic LaTeX paper by invoking five existing skills in fixed order: (1) paper-polish, (2) paper-self-revise, (3) paper-style…
Install Paper Pipeline
$ npx skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill paper-pipeline -a claude-codeProject install by default; add -g for ~/.claude/skills/.
$ gh skill install brycewang-stanford/Auto-Empirical-Research-Skills paper-pipeline --agent claude-codeProject scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).
$ git clone --depth 1 https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/67-econfin-workflow-toolkit/paper-pipeline .claude/skills/paper-pipeline && rm -rf skills-srcUse ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.
Claude Code skills documentation · loads skills from .claude/skills/
Install the "paper-pipeline" agent skill from https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/main/skills/67-econfin-workflow-toolkit/paper-pipeline into .claude/skills/paper-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "paper-pipeline", then confirm the skill loads.Claude Code copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$skill-installer install https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/main/skills/67-econfin-workflow-toolkit/paper-pipelineType this inside Codex. $skill-installer <name> installs a curated skill from openai/skills. The installer writes to $CODEX_HOME/skills (default ~/.codex/skills). Restart Codex if the skill does not show up.
$ npx skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill paper-pipeline -a codexProject install goes to .agents/skills/; add -g for ~/.codex/skills/.
$ gh skill install brycewang-stanford/Auto-Empirical-Research-Skills paper-pipeline --agent codexProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills.git skills-src && mkdir -p .agents/skills && cp -r skills-src/skills/67-econfin-workflow-toolkit/paper-pipeline .agents/skills/paper-pipeline && rm -rf skills-srcUse ~/.agents/skills/ instead of .agents/skills for a personal install.
Codex skills documentation · loads skills from .agents/skills/
Install the "paper-pipeline" agent skill from https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/main/skills/67-econfin-workflow-toolkit/paper-pipeline into .agents/skills/paper-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "paper-pipeline", then confirm the skill loads.Codex copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill paper-pipeline -a cursorProject install goes to .agents/skills/; add -g for ~/.cursor/skills/.
$ gh skill install brycewang-stanford/Auto-Empirical-Research-Skills paper-pipeline --agent cursorProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills.git skills-src && mkdir -p .cursor/skills && cp -r skills-src/skills/67-econfin-workflow-toolkit/paper-pipeline .cursor/skills/paper-pipeline && rm -rf skills-srcUse ~/.cursor/skills/ instead of .cursor/skills for a personal install.
Cursor skills documentation · loads skills from .cursor/skills/, .agents/skills/, .claude/skills/, .codex/skills/
Install the "paper-pipeline" agent skill from https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/main/skills/67-econfin-workflow-toolkit/paper-pipeline into .cursor/skills/paper-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "paper-pipeline", then confirm the skill loads.Cursor copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gemini skills install https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills.git --path skills/67-econfin-workflow-toolkit/paper-pipeline--scope user (default) or --scope workspace; --path is the subfolder of the repo that holds the skill; --consent skips the security confirmation prompt.
$ npx skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill paper-pipeline -a gemini-cliProject install goes to .agents/skills/; add -g for ~/.gemini/skills/.
$ gh skill install brycewang-stanford/Auto-Empirical-Research-Skills paper-pipeline --agent gemini-cliProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills.git skills-src && mkdir -p .gemini/skills && cp -r skills-src/skills/67-econfin-workflow-toolkit/paper-pipeline .gemini/skills/paper-pipeline && rm -rf skills-srcUse ~/.gemini/skills/ instead of .gemini/skills for a personal install, then run /skills reload.
Gemini CLI skills documentation · loads skills from .gemini/skills/, .agents/skills/
Install the "paper-pipeline" agent skill from https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/main/skills/67-econfin-workflow-toolkit/paper-pipeline into .gemini/skills/paper-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "paper-pipeline", then confirm the skill loads.Gemini CLI copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ gh skill install brycewang-stanford/Auto-Empirical-Research-Skills paper-pipelineInstalls for Copilot at project scope by default; add --scope user for a personal install. Preview a skill first with gh skill preview. Needs GitHub CLI 2.90.0 or later (public preview).
$ npx skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill paper-pipeline -a github-copilotProject install goes to .agents/skills/; add -g for ~/.copilot/skills/.
$ git clone --depth 1 https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills.git skills-src && mkdir -p .github/skills && cp -r skills-src/skills/67-econfin-workflow-toolkit/paper-pipeline .github/skills/paper-pipeline && rm -rf skills-srcUse ~/.copilot/skills/ instead of .github/skills for a personal install. Commit .github/skills so cloud agent and code review can use it.
GitHub Copilot skills documentation · loads skills from .github/skills/, .claude/skills/, .agents/skills/
Install the "paper-pipeline" agent skill from https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/main/skills/67-econfin-workflow-toolkit/paper-pipeline into .github/skills/paper-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "paper-pipeline", then confirm the skill loads.GitHub Copilot copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
$ npx skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill paper-pipeline -a opencodeOpenCode documents no install command of its own. Project install goes to .agents/skills/; add -g for ~/.config/opencode/skills/.
$ gh skill install brycewang-stanford/Auto-Empirical-Research-Skills paper-pipeline --agent opencodeProject scope by default (.agents/skills/); add --scope user for a personal install.
$ git clone --depth 1 https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills.git skills-src && mkdir -p .opencode/skills && cp -r skills-src/skills/67-econfin-workflow-toolkit/paper-pipeline .opencode/skills/paper-pipeline && rm -rf skills-srcUse ~/.config/opencode/skills/ instead of .opencode/skills for a personal install.
OpenCode skills documentation · loads skills from .opencode/skills/, .claude/skills/, .agents/skills/
Install the "paper-pipeline" agent skill from https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/main/skills/67-econfin-workflow-toolkit/paper-pipeline into .opencode/skills/paper-pipeline/ in this project. Copy the whole folder (SKILL.md and every file beside it), keep the folder name "paper-pipeline", then confirm the skill loads.OpenCode copies the folder itself, the same result as the manual copy. Check what it changed before you commit it.
Facts
- Skill name
paper-pipeline- GitHub stars
- 4.6k
- Token cost
- ~2.6k tokens
- SKILL.md length
- 1,224 words
- Files
- 1
- Skills in repo
- 383
- Repo updated
- First seen
- Licence
- Custom licence
At a glance
Orchestrate the complete post-first-draft polishing pipeline for an academic LaTeX paper by invoking five existing skills in fixed order: (1) paper-polish, (2) paper-self-revise, (3) paper-style…
- Works in 7 steps: Receive folder path from $ARGUMENTS or… → Dropbox conflict check: Glob the project… → Check for a previous pipeline run: if… → …
- User says paper pipeline / paper-pipeline / 论文流水线 / 全流程打磨 / 一条龙打磨 / 初稿打磨 / full polish pipeline / run the whole pipeline
- SKILL.md covers Overview, Phase 0: Setup (do all of this…, Stage Execution Protocol and Stage-Specific Notes, plus 2 more sections
- Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md
What it does
Paper Pipeline is an agent skill from brycewang-stanford/Auto-Empirical-Research-Skills. Orchestrate the complete post-first-draft polishing pipeline for an academic LaTeX paper by invoking five existing skills in fixed order: (1) paper-polish, (2) paper-self-revise, (3) paper-style, (4) paper-polish again, (5) reference-verify. Trigger when user says "paper pipeline" / "paper-pipeline" / "论文流水线" / "全流程打磨" / "一条龙打磨" / "初稿打磨" / "full polish pipeline" / "run the whole pipeline", or wants the entire post-draft polishing sequence run on a paper folder. Use this skill whenever the user asks for several…
Its SKILL.md is about 2.6k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.
It sits in Documents & Office, covering LaTeX. It works with LaTeX. The repository describes itself as: 🔬 A curated collection of 23,000+ agent skills for empirical research across 8 social science disciplines. | 精选 23,000+ AI Agent 技能库，覆盖8大社会科学学科的实证研究。CoPaper.AI…
When your agent uses it
- User says paper pipeline / paper-pipeline / 论文流水线 / 全流程打磨 / 一条龙打磨 / 初稿打磨 / full polish pipeline / run the whole pipeline
- Wants the entire post-draft polishing sequence run on a paper folder
- The user asks for several paper-finishing steps (polish + revise + style + reference check) on one manuscript in one go
- Even if they dont name every individual skill
Example prompts
- “paper pipeline”
- “paper-pipeline”
- “full polish pipeline”
- “/paper-pipeline”
Requirements
- Pre-approved tools (allowed-tools): Skill, Read, Edit, Write, Glob, Grep, Bash, AskUserQuestion, WebSearch, WebFetch, Agent
Workflow steps
7 steps, taken from the first numbered list in SKILL.md.
- Receive folder path from $ARGUMENTS or ask. Verify main.tex exists with Glob.
- Dropbox conflict check: Glob the project folder for *冲突副本* and *conflicted copy*. If found, stop and ask the user to resolve which version…
- Check for a previous pipeline run: if pipeline_state.json exists in the folder and has incomplete stages, show its status and ask: resume…
- Collect the target journal now (needed by Stage 3, asked upfront so the pipeline never stalls mid-run). If given in $ARGUMENTS, use it…
- Ask for the interaction mode with AskUserQuestion — this is the single most important setup question, because five interactive skills…
- Create the backup baseline: make a pipeline_backups/ subfolder and copy main.tex → pipeline_backups/main_stage0.tex and ref.bib →…
- Write pipeline_state.json in the project folder
What it can do on your machine
Read from SKILL.md and the folder at commit 9fa87d8. It shows what the files ask for, not the result of running them.
Tool permissions
Pre-approves these tools, so the agent can use them without asking each time:
SkillReadEditWriteGlobGrepBashAskUserQuestionWebSearchWebFetch
…and 1 more on the same allowed-tools line.
From allowed-tools in the SKILL.md frontmatter.
Runs code
No scripts in the folder and no shell commands in SKILL.md (its code samples are json).
From the folder's file list and the shell code blocks in SKILL.md.
Network
No URLs in SKILL.md.
From URLs in SKILL.md, links to its own repository left out.
Credentials
Names no API keys, tokens, secrets or passwords.
From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.
Context cost
Paper Pipeline loads about 2.6k tokens when it runs. Until then it costs about 168 tokens; SKILL.md has 1,224 words of instructions outside code blocks.
Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.
Safety
Auto-check: notes
The automated check noted patterns worth knowing about, such as sudo or a known installer.
- NotePre-approves every shell command (allowed-tools: Bash)SKILL.md
allowed-tools: Skill, Read, Edit, Write, Glob, Grep, Bash, AskUserQuestion, WebSearch, WebFetch, Agent
Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.
SKILL.md
Its licence (Custom licence) doesn't allow us to republish the file, so here is its outline and opening line. It has 1,224 words (~2,626 tokens).
“This skill runs the full post-first-draft polishing process on an academic paper by invoking five existing skills in a fixed order. It is an orchestrator: it does not duplicate any sub-skill's logic. Each stage is executed by invoking the corresponding…”
- name
- paper-pipeline
- allowed-tools
- Skill, Read, Edit, Write, Glob, Grep, Bash, AskUserQuestion, WebSearch, WebFetch, Agent
- argument-hint
- [path-to-project-folder] [target-journal(optional)]
Files
Just SKILL.md in skills/67-econfin-workflow-toolkit/paper-pipeline of brycewang-stanford/Auto-Empirical-Research-Skills.
Open the folder on GitHubat commit 9fa87d8
Compare with similar skills
Paper Pipeline next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.
| Skill | Stars | Used in | Tokens | Auto-check | Licence | Repo updated |
|---|---|---|---|---|---|---|
| Paper Pipeline this skillbrycewang-stanford/Auto-Empirical-Research-Skills | 4.6k | — | ~2.6k | Automated safety check: Notes | Custom licence | |
| Research Writingalfonso0512/research-writing-skill | 490 | 1 repos | ~818 | Automated safety check: Pass | MIT | |
| Paper WritingMLNLP-World/Paper-Writing-Tips | 4.7k | — | ~630 | Automated safety check: Pass | None | |
| PaperjurySpark-To-Paper-Skills/paperjury | 1.2k | — | ~5.3k | Automated safety check: Pass | MIT | |
| PDFzai-org/ZCode | 7.7k | — | ~18k | Automated safety check: Notes | Proprietary | |
| Thesis Defense PPTX Builderzouchenzhen/thesis-defense-pptx-skill | 266 | — | ~2.4k | Automated safety check: Pass | Apache-2.0 |
Similar skills
Paper Writing
MLNLP-World/Paper-Writing-Tips
学术论文写作检查与优化助手。基于 MLNLP-World 社区整理的论文写作技巧，帮助检查和优化学术论文。Use when: (1) 检查论文 LaTeX 格式和排版, (2) 优化公式符号使用, (3) 改进图表设计, (4) 润色英文学术表达, (5) 检查参考文献格式, (6) 投稿前终稿检查, (7) 用户询问论文写作技巧或规范。
Paperjury
Spark-To-Paper-Skills/paperjury
Three modes for CS-conference papers (CVPR/ICCV/ECCV vision, ACL/EMNLP/NAACL NLP, ICLR/NeurIPS/ICML/AAAI ML).
PDF
zai-org/ZCode
Professional PDF toolkit covering four production workflows: reports, creative visuals, academic LaTeX, and existing PDF processing.
Thesis Defense PPTX Builder
zouchenzhen/thesis-defense-pptx-skill
Builds an editable thesis defense PowerPoint from a thesis PDF or LaTeX project while preserving a supplied university or lab template, then runs a visual quality check.
Literature Survey
ai4s-research/ai4s-skills
A skill your agent uses when the user wants a comprehensive literature survey on a specific research topic.
More from brycewang-stanford/Auto-Empirical-Research-Skills
All 383 skills in this repoAer Consistency
brycewang-stanford/Auto-Empirical-Research-Skills
A skill your agent uses when auditing a finished or near-finished AER, AER:Insights, or AEJ manuscript for internal consistency: headline numbers across abstract, introduction, results, and tables…
Latex Paper En
brycewang-stanford/Auto-Empirical-Research-Skills
English LaTeX academic paper assistant for existing .tex projects.
Bayesian Workflow
brycewang-stanford/Auto-Empirical-Research-Skills
Opinionated Bayesian modeling workflow with PyMC and ArviZ. An agent skill from brycewang-stanford/Auto-Empirical-Research-Skills.
Daily Paper Generator
brycewang-stanford/Auto-Empirical-Research-Skills
A skill your agent uses when the user asks to "generate daily paper", "search arXiv for EEG papers", "find EEG decoding papers", "review brain-computer interface papers", or wants to create paper…
Five Questions
brycewang-stanford/Auto-Empirical-Research-Skills
Deeply analyze any empirical economics PDF using the five-question framework (五问框架): research question, identification strategy, core estimand, robustness logic, and scholarly contribution.
Kaggle Research
brycewang-stanford/Auto-Empirical-Research-Skills
A skill your agent uses when a research task needs reproducible Kaggle discovery, metadata inspection, bounded public-data downloads, competition or kernel discovery, model discovery, or an…
Related
Works with
Categories
Questions about Paper Pipeline
What does Paper Pipeline do?
Orchestrate the complete post-first-draft polishing pipeline for an academic LaTeX paper by invoking five existing skills in fixed order: (1) paper-polish, (2) paper-self-revise, (3) paper-style…. Paper Pipeline is an agent skill from brycewang-stanford/Auto-Empirical-Research-Skills. Orchestrate the complete post-first-draft polishing pipeline for an academic LaTeX paper by invoking five existing skills in fixed order: (1) paper-polish, (2) paper-self-revise, (3) paper-style, (4) paper-polish again, (5) reference-verify.
When should I use Paper Pipeline?
Paper Pipeline fits situations like: user says paper pipeline / paper-pipeline / 论文流水线 / 全流程打磨 / 一条龙打磨 / 初稿打磨 / full polish pipeline / run the whole pipeline; wants the entire post-draft polishing sequence run on a paper folder; the user asks for several paper-finishing steps (polish + revise + style + reference check) on one manuscript in one go; even if they dont name every individual skill.
How do I install Paper Pipeline in Claude Code?
Run `npx skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill paper-pipeline -a claude-code`. Or copy the skill folder (skills/67-econfin-workflow-toolkit/paper-pipeline in brycewang-stanford/Auto-Empirical-Research-Skills) into .claude/skills/paper-pipeline in your project. Claude Code loads it when a task matches its description.
How do I install Paper Pipeline in Codex?
Run `npx skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill paper-pipeline -a codex`. Or copy the skill folder (skills/67-econfin-workflow-toolkit/paper-pipeline in brycewang-stanford/Auto-Empirical-Research-Skills) into .agents/skills/paper-pipeline in your project. Codex loads it when a task matches its description.
Can I use Paper Pipeline in Cursor, Gemini CLI or GitHub Copilot?
Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add brycewang-stanford/Auto-Empirical-Research-Skills --skill paper-pipeline -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/paper-pipeline, .gemini/skills/paper-pipeline, .github/skills/paper-pipeline and .opencode/skills/paper-pipeline in your project.
What does Paper Pipeline need to run?
SKILL.md names no scripts, command-line tools or credentials: Paper Pipeline is instructions for the agent only. Its frontmatter pre-approves these tools: Skill, Read, Edit, Write, Glob, Grep, Bash, AskUserQuestion, WebSearch, WebFetch, Agent.
Does Paper Pipeline access the network?
SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.
Is Paper Pipeline safe to install?
Our automated static check of SKILL.md found notes only (pre-approves every shell command (allowed-tools: bash)), nothing it rates as a warning. It is not a guarantee. Review the folder before installing.
What licence does Paper Pipeline use?
Paper Pipeline has a licence file (the repository's licence) that doesn't match a standard licence. Read it on GitHub before reusing the skill.
How many tokens does Paper Pipeline use?
About 2.6k tokens (SKILL.md is roughly 11k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.
What are the alternatives to Paper Pipeline?
Skills that share tags, products or a category with Paper Pipeline: Research Writing (alfonso0512/research-writing-skill, 490 stars), Paper Writing (MLNLP-World/Paper-Writing-Tips, 4.7k stars), Paperjury (Spark-To-Paper-Skills/paperjury, 1.2k stars) and PDF (zai-org/ZCode, 7.7k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.
Who maintains Paper Pipeline?
brycewang-stanford (a GitHub user) maintains it in brycewang-stanford/Auto-Empirical-Research-Skills, which has 4,556 GitHub stars. The repository holds 383 skills in this directory. The repository was last updated on October 5, 2026.
Source: brycewang-stanford/Auto-Empirical-Research-Skills on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.