Agent skill

Bioconductor Mosbi

by bioMate-AI in bioMate-AI/biomate-bioconductor-kb

This package is a implementation of biclustering ensemble method MoSBi (Molecular signature Identification from Biclustering).

Custom licenceAuto-check passed

Install Bioconductor Mosbi

skills CLI
$ npx skills add bioMate-AI/biomate-bioconductor-kb --skill bioconductor-mosbi -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install bioMate-AI/biomate-bioconductor-kb bioconductor-mosbi --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/bioMate-AI/biomate-bioconductor-kb.git skills-src && mkdir -p .claude/skills && cp -r skills-src/skills/general/mosbi .claude/skills/bioconductor-mosbi && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
bioconductor-mosbi
GitHub stars
804
Token cost
~1.4k tokens
SKILL.md length
440 words
Files
1
Skills in repo
112
Repo updated
First seen
Licence
Custom licence

At a glance

This package is a implementation of biclustering ensemble method MoSBi (Molecular signature Identification from Biclustering).

  • SKILL.md covers Workflows, When to Use, When NOT to Use and Data Requirements, plus 6 more sections
  • Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md

What it does

Bioconductor Mosbi is an agent skill from bioMate-AI/biomate-bioconductor-kb. This package is a implementation of biclustering ensemble method MoSBi (Molecular signature Identification from Biclustering). MoSBi provides standardized interfaces for biclustering results and can combine their results with a multi-algorithm ensemble approach to compute robust ensemble biclusters on molecular omics data. This is done by computing similarity networks of biclusters and filtering for overlaps using a custom error model. After that, the louvain modularity it used to extract biclus

Its SKILL.md is about 1.4k tokens, which your agent loads only when the skill is triggered. It is a single SKILL.md file with no bundled scripts.

The repository describes itself as: BioMate-KB Bioconductor Skills — 200 packages (top 100 by downloads + 100 rising stars) as vignette-grounded Claude/agent skills, with per-package workflow recipes.

Example prompts

  • “/bioconductor-mosbi”

What it can do on your machine

Read from SKILL.md and the folder at commit c9bd4d8. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    No scripts in the folder and no shell commands in SKILL.md (its code samples are r).

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    Links to these hosts (documentation or services it may open):

    • bioconductor.org

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Bioconductor Mosbi loads about 1.4k tokens when it runs. Until then it costs about 130 tokens; SKILL.md has 440 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~130
When it runs · the whole SKILL.md, loaded when a task matches
~1.4k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check passed

The automated check found no risky patterns in SKILL.md.

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

Its licence (Custom licence) doesn't allow us to republish the file, so here is its outline and opening line. It has 440 words (~1,366 tokens).

“Run multiple biclustering algorithms on a data matrix, construct a similarity network with an error model, extract robust communities, and generate consensus ensemble biclusters.”

— opening of SKILL.md by bioMate-AI, Custom licence
name
bioconductor-mosbi
when_to_use
Use when: This package is a implementation of biclustering ensemble method MoSBi (Molecular signature Identification from Bicluste; example-workflow…
user-invocable
false

Read the full SKILL.md on GitHub

Files

Just SKILL.md in skills/general/mosbi of bioMate-AI/biomate-bioconductor-kb.

Open the folder on GitHubat commit c9bd4d8

Compare with similar skills

Bioconductor Mosbi next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Bioconductor Mosbi compared with similar skills
SkillStarsUsed inTokensAuto-checkLicenceRepo updated
Bioconductor Mosbi this skillbioMate-AI/biomate-bioconductor-kb804—~1.4kAutomated safety check: PassCustom licence
Santa Methodaffaan-m/ECC277k3 repos~3.1kAutomated safety check: PassMIT
Santa Methodaffaan-m/ECC276k—~2.1kAutomated safety check: PassMIT
Santa Methodaffaan-m/ECC276k—~1.9kAutomated safety check: PassMIT
Ensembl Databasedavila7/claude-code-templates33k10 repos~2.1kAutomated safety check: PassMIT
Modern Array Methodsthedaviddias/Front-End-Checklist74k—~494Automated safety check: PassMIT

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Questions about Bioconductor Mosbi

What does Bioconductor Mosbi do?

This package is a implementation of biclustering ensemble method MoSBi (Molecular signature Identification from Biclustering). Bioconductor Mosbi is an agent skill from bioMate-AI/biomate-bioconductor-kb. This package is a implementation of biclustering ensemble method MoSBi (Molecular signature Identification from Biclustering).

How do I install Bioconductor Mosbi in Claude Code?

Run `npx skills add bioMate-AI/biomate-bioconductor-kb --skill bioconductor-mosbi -a claude-code`. Or copy the skill folder (skills/general/mosbi in bioMate-AI/biomate-bioconductor-kb) into .claude/skills/bioconductor-mosbi in your project. Claude Code loads it when a task matches its description.

How do I install Bioconductor Mosbi in Codex?

Run `npx skills add bioMate-AI/biomate-bioconductor-kb --skill bioconductor-mosbi -a codex`. Or copy the skill folder (skills/general/mosbi in bioMate-AI/biomate-bioconductor-kb) into .agents/skills/bioconductor-mosbi in your project. Codex loads it when a task matches its description.

Can I use Bioconductor Mosbi in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add bioMate-AI/biomate-bioconductor-kb --skill bioconductor-mosbi -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/bioconductor-mosbi, .gemini/skills/bioconductor-mosbi, .github/skills/bioconductor-mosbi and .opencode/skills/bioconductor-mosbi in your project.

What does Bioconductor Mosbi need to run?

SKILL.md names no scripts, command-line tools or credentials: Bioconductor Mosbi is instructions for the agent only.

Does Bioconductor Mosbi access the network?

SKILL.md names 1 domain. As links in the text: bioconductor.org. This is read from the text; nothing was executed.

Is Bioconductor Mosbi safe to install?

Our automated static check of SKILL.md found no risky patterns, such as piping downloads into a shell, reading credential files or hidden Unicode. It is not a guarantee. Review the folder before installing.

What licence does Bioconductor Mosbi use?

Bioconductor Mosbi has a licence file (the repository's licence) that doesn't match a standard licence. Read it on GitHub before reusing the skill.

How many tokens does Bioconductor Mosbi use?

About 1.4k tokens (SKILL.md is roughly 5.5k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full.

What are the alternatives to Bioconductor Mosbi?

Skills that share tags, products or a category with Bioconductor Mosbi: Santa Method (affaan-m/ECC, 277k stars), Santa Method (affaan-m/ECC, 276k stars), Santa Method (affaan-m/ECC, 276k stars) and Ensembl Database (davila7/claude-code-templates, 33k stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Bioconductor Mosbi?

bioMate-AI (a GitHub organization) maintains it in bioMate-AI/biomate-bioconductor-kb, which has 804 GitHub stars. The repository holds 112 skills in this directory. The repository was last updated on June 20, 2026.

Source: bioMate-AI/biomate-bioconductor-kb on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.