Agent skill

Codex History Ingest

by Ar9av in Ar9av/obsidian-wiki

Ingest Codex CLI conversation/session history into Obsidian as distilled knowledge.

MITAuto-check: notesKnowledge Management

Install Codex History Ingest

skills CLI
$ npx skills add Ar9av/obsidian-wiki --skill codex-history-ingest -a claude-code

Project install by default; add -g for ~/.claude/skills/.

GitHub CLI
$ gh skill install Ar9av/obsidian-wiki codex-history-ingest --agent claude-code

Project scope by default; add --scope user for a personal install. Needs GitHub CLI 2.90.0 or later (public preview).

Manual copy
$ git clone --depth 1 https://github.com/Ar9av/obsidian-wiki.git skills-src && mkdir -p .claude/skills && cp -r skills-src/.skills/codex-history-ingest .claude/skills/codex-history-ingest && rm -rf skills-src

Use ~/.claude/skills/ instead of .claude/skills for a personal install. The folder must contain SKILL.md.

Claude Code skills documentation · loads skills from .claude/skills/

Facts

Skill name
codex-history-ingest
GitHub stars
3.5k
Token cost
~2.2k tokens
SKILL.md length
860 words
Files
2 (incl. references)
Skills in repo
39
Repo updated
First seen
Licence
MIT

At a glance

Ingest Codex CLI conversation/session history into Obsidian as distilled knowledge.

  • Works in 6 steps: Survey and Compute Delta → Parse Session Index First → Parse Rollout JSONL Safely → …
  • Mining ~/.codex sessions
  • SKILL.md covers Before You Start, Ingest Modes, Codex Data Layout and Step 1: Survey and Compute Delta, plus 8 more sections
  • Instructions only: no scripts, shell commands, URLs or credentials in SKILL.md

What it does

Codex History Ingest is an agent skill from Ar9av/obsidian-wiki. Ingest Codex CLI conversation/session history into Obsidian as distilled knowledge. Use for importing or mining ~/.codex sessions, rollout files, indexes, or transcript logs; use wiki-agent for targeted topic-only recall.

Its SKILL.md is about 2.2k tokens, which your agent loads only when the skill is triggered. The skill folder holds 2 other files, including reference files (for example `references/codex-data-format.md`).

It sits in Knowledge Management, covering LLM wikis. It works with Obsidian. The repository describes itself as: Framework for AI agents to build and maintain a digital brain through Obsidian wiki | Memory System for Agents. The licence is MIT.

When your agent uses it

  • Mining ~/.codex sessions
  • Transcript logs
  • Use wiki-agent for targeted topic-only recall

Example prompts

  • “/codex-history-ingest”

Workflow steps

6 steps, taken from the step headings in SKILL.md.

  1. Survey and Compute Delta
  2. Parse Session Index First
  3. Parse Rollout JSONL Safely
  4. Cluster by Topic
  5. Distill into Wiki Pages
  6. Update Manifest, Log, and Index

What it can do on your machine

Read from SKILL.md and the folder at commit 4a0630b. It shows what the files ask for, not the result of running them.

  • Tool permissions

    Pre-approves nothing: there is no allowed-tools line, so your agent's usual permission prompts apply.

    From allowed-tools in the SKILL.md frontmatter.

  • Runs code

    No scripts in the folder and no shell commands in SKILL.md (its code samples are bash, json and yaml).

    From the folder's file list and the shell code blocks in SKILL.md.

  • Network

    No URLs in SKILL.md.

    From URLs in SKILL.md, links to its own repository left out.

  • Credentials

    Names no API keys, tokens, secrets or passwords.

    From names ending in _API_KEY, _TOKEN, _SECRET, _KEY or _PASSWORD in SKILL.md.

Context cost

Codex History Ingest loads about 2.2k tokens when it runs, and up to ~2.8k if it reads all its reference files. Until then it costs about 61 tokens; SKILL.md has 860 words of instructions outside code blocks.

Always · name and description, kept in context so the agent knows when to use it
~61
When it runs · the whole SKILL.md, loaded when a task matches
~2.2k
With references · SKILL.md plus every file in references/, read only if the agent opens them
~2.8k

Estimates: characters ÷ 4, the usual rule of thumb; real counts depend on the model's tokenizer. Scripts and assets cost tokens only if the agent reads them.

Safety

Auto-check: notes

The automated check noted patterns worth knowing about, such as sudo or a known installer.

  • NoteMentions a .env fileSKILL.md:18
    line `@name` override → walk up CWD for `.env` → global config → prompt setup). This gives `OBSIDIAN_VAULT_PATH` and `CO

Automated static check — not a guarantee. Review scripts before installing. It scans the text of SKILL.md for risky patterns (piping downloads into a shell, reading credential files, hidden Unicode, destructive commands); files beside SKILL.md are not scanned.

SKILL.md

The full file from Ar9av/obsidian-wiki at commit 4a0630b, republished under its MIT licence (© Ar9av). 860 words, ~2,156 tokens.

Download SKILL.mdSave it as .claude/skills/codex-history-ingest/SKILL.md (or your agent's skills folder). This skill also uses 1 other file; get the full folder from GitHub.
name
codex-history-ingest
description
Ingest Codex CLI conversation/session history into Obsidian as distilled knowledge. Use for importing or mining ~/.codex sessions, rollout files, indexes, or transcript logs; use wiki-agent for targeted topic-only recall.

Codex History Ingest — Conversation Mining

You are extracting knowledge from the user's past Codex sessions and distilling it into the Obsidian wiki. Session logs are rich but noisy: focus on durable knowledge, not operational telemetry.

This skill can be invoked directly or via the wiki-history-ingest router (/wiki-history-ingest codex).

Before You Start

Writing profile: Before drafting or rewriting natural-language Markdown, read and apply the Writing Profile Resolution section in llm-wiki/SKILL.md. Framework schema, provenance, safety, and operation-specific requirements take precedence. WRITING.md preferences apply only to newly drafted or rewritten natural-language Markdown; preserve source content and structured records.

  1. Resolve config — follow the Config Resolution Protocol in llm-wiki/SKILL.md (inline @name override → walk up CWD for .env → global config → prompt setup). This gives OBSIDIAN_VAULT_PATH and CODEX_HISTORY_PATH (defaults to ~/.codex)
  2. Read .manifest.json at the vault root to check what has already been ingested
  3. Read index.md at the vault root to understand what the wiki already contains

Ingest Modes

Append Mode (default)

Check .manifest.json for each source file. Only process:

  • Files not in the manifest (new session rollouts, new index files)
  • Files whose modification time is newer than ingested_at in the manifest

Use this mode for regular syncs.

Full Mode

Process everything regardless of manifest. Use after wiki-rebuild or if the user explicitly asks for a full re-ingest.

Codex Data Layout

Codex stores local artifacts under ~/.codex/.

~/.codex/
├── sessions/                          # Session rollout logs by date
│   └── YYYY/MM/DD/
│       └── rollout-<timestamp>-<id>.jsonl
├── archived_sessions/                 # Archived rollout logs
├── session_index.jsonl                # Lightweight index of thread id/name/updated_at
├── history.jsonl                      # Local transcript history (if persistence enabled)
├── config.toml                        # User config (contains history settings)
└── state_*.sqlite / logs_*.sqlite     # Runtime DBs (usually skip)
Key data sources ranked by value
  1. session_index.jsonl — best inventory source for IDs, titles, and freshness
  2. sessions/**/rollout-*.jsonl — rich structured transcript events
  3. history.jsonl — useful fallback/timeline aid if enabled

Avoid ingesting SQLite internals unless the user explicitly asks.

Step 1: Survey and Compute Delta

Scan CODEX_HISTORY_PATH and compare against .manifest.json:

  • ~/.codex/session_index.jsonl
  • ~/.codex/sessions/**/rollout-*.jsonl
  • ~/.codex/archived_sessions/** (optional; only if user asks for archived history)
  • ~/.codex/history.jsonl (optional fallback)

Classify each file:

  • New — not in manifest
  • Modified — in manifest but file is newer than ingested_at
  • Unchanged — already ingested and unchanged

Report a concise delta summary before deep parsing.

Step 2: Parse Session Index First

session_index.jsonl typically has entries like:

json
{"id":"...","thread_name":"...","updated_at":"..."}

Use it to:

  • Build a canonical session inventory
  • Prioritize recent/high-signal sessions
  • Map rollout IDs to human-readable thread names

Step 3: Parse Rollout JSONL Safely

Each rollout-*.jsonl line is an event envelope with:

json
{
  "timestamp": "...",
  "type": "session_meta|turn_context|event_msg|response_item",
  "payload": { ... }
}
Extraction rules
  • Prioritize user intent and assistant-visible outputs
  • Favor response_item records with user/assistant message content
  • Use event_msg selectively for meaningful milestones; ignore pure telemetry
  • Treat session_meta as metadata (cwd, model, ids), not user knowledge
Skip/noise filters
  • Token accounting events
  • Tool plumbing with no semantic content
  • Raw command output unless it contains reusable decisions/patterns
  • Repeated plan snapshots unless they add novel decisions
Critical privacy filter

Rollout logs can include injected instructions, tool payloads, and sensitive text. Do not ingest verbatim system/developer prompts or secrets.

  • Remove API keys, tokens, passwords, credentials
  • Redact private identifiers unless relevant and approved
  • Summarize instead of quoting raw transcripts

Step 4: Cluster by Topic

Do not create one wiki page per session.

  • Group by stable topics across many sessions
  • Split mixed sessions into separate themes
  • Merge recurring concepts across dates/projects
  • Use cwd from metadata to infer project scope

Step 5: Distill into Wiki Pages

Route extracted knowledge using existing wiki conventions:

  • Project-specific architecture/process -> projects/<name>/...
  • General concepts -> concepts/
  • Recurring techniques/debug playbooks -> skills/
  • Tools/services -> entities/
  • Cross-session patterns -> synthesis/

For each impacted project, create/update projects/<name>/<name>.md (project name as filename, never _project.md).

Show full SKILL.md (329 more words)Show less
Writing rules
  • Distill knowledge, not chronology
  • Avoid "on date X we discussed..." unless date context is essential
  • Add summary: frontmatter on each new/updated page (1-2 sentences, <= 200 chars)
  • Add confidence and lifecycle fields to every new page:
    yaml
    base_confidence: 0.42
    lifecycle: draft
    lifecycle_changed: <ISO date today>
    Leave lifecycle unchanged on update.
  • Add provenance markers:
    • ^[extracted] when directly grounded in explicit session content
    • ^[inferred] when synthesizing patterns across events/sessions
    • ^[ambiguous] when sessions conflict
  • Add/update provenance: frontmatter mix for each changed page

Step 6: Update Manifest, Log, and Index

Update .manifest.json

For each processed source file:

  • ingested_at, size_bytes, modified_at
  • source_type: codex_rollout | codex_index | codex_history
  • project: inferred project name (when applicable)
  • pages_created, pages_updated

Add/update a top-level project/session summary block:

json
{
  "project-name": {
    "source_path": "~/.codex/sessions/...",
    "last_ingested": "TIMESTAMP",
    "sessions_ingested": 12,
    "sessions_total": 40,
    "index_updated_at": "TIMESTAMP"
  }
}
Update special files

Update index.md, log.md, and hot.md with one locked call:

bash
obsidian-wiki memory sync CODEX_HISTORY_INGEST \
  sessions=<sessions> pages_updated=<pages_updated> \
  pages_created=<pages_created> mode=<mode> \
  --takeaways "Ingested 12 Codex sessions; surfaced recurring patterns in CLI tooling and shell scripting."

Never hand-edit index.md, log.md, or hot.md — the command takes the lock that keeps a parallel writer from dropping your update. --takeaways is the one-line conceptual summary that used to go in Recent Activity; omit it to leave the previous takeaways untouched.

See .skills/llm-wiki/references/MEMORY.md for the full procedure.

Privacy and Compliance

  • Distill and synthesize; avoid raw transcript dumps
  • Default to redaction for anything that looks sensitive
  • Ask the user before storing personal/sensitive details
  • Keep references to other people minimal and purpose-bound

Reference

See references/codex-data-format.md for field-level parsing notes and extraction guidance.

QMD Refresh After Vault Writes

QMD is a search index, not the source of truth. If $QMD_WIKI_COLLECTION is empty or unset, skip this step. Run it only after this skill has written or rewritten vault markdown. If QMD refresh fails, do not roll back the vault changes; report the QMD status separately.

Use $QMD_CLI if set; otherwise use qmd.

bash
${QMD_CLI:-qmd} update

If the output says vectors are needed or embeddings may be stale, run:

bash
${QMD_CLI:-qmd} embed

Verify the collection with either:

bash
${QMD_CLI:-qmd} ls "$QMD_WIKI_COLLECTION"

or, when a specific page path is known:

bash
${QMD_CLI:-qmd} get "qmd://$QMD_WIKI_COLLECTION/<page>.md" -l 5

Record one of:

  • QMD refreshed: update + embed + verified
  • QMD refreshed: update only + verified
  • QMD skipped: QMD_WIKI_COLLECTION unset
  • QMD skipped: qmd CLI unavailable
  • QMD failed: <short error summary>

© Ar9av, MIT. Rendered from Markdown: HTML in the file is shown as text, images as links, and headings moved down two levels. Raw file

Files

SKILL.md and 1 other file (references) in .skills/codex-history-ingest of Ar9av/obsidian-wiki.

  • SKILL.md
  • references/codex-data-format.md

Open the folder on GitHubat commit 4a0630b

Compare with similar skills

Codex History Ingest next to the 5 skills that share the most tags, products or categories with it. Stars are the repository's; “used in” counts other GitHub owners with a copy.

Codex History Ingest compared with similar skills
SkillStarsUsed inTokensAuto-checkLicenceRepo updated
Codex History Ingest this skillAr9av/obsidian-wiki3.5k—~2.2kAutomated safety check: NotesMIT
LLM Wikilewislulu/llm-wiki-skill655—~3.7kAutomated safety check: PassNone
LLM Wikizosmaai/pi-llm-wiki608—~4.4kAutomated safety check: PassMIT
LLM Wikipraneybehl/llm-wiki-plugin118—~5.7kAutomated safety check: PassMIT
Karpathy WikiSherwinQ/karpathy-wiki114—~967Automated safety check: PassMIT
My LLM WikiMartinLwx/dotfiles140—~2.7kAutomated safety check: PassNone

Similar skills

  • LLM Wiki

    lewislulu/llm-wiki-skill

    Build and maintain a Karpathy-style LLM knowledge base — a self-compiling Obsidian markdown wiki where an Agent ingests raw sources, compiles cross-linked concept/entity/summary pages, answers…

    655 GitHub stars~3.7k tokensUpdated 5 mo ago
    Knowledge ManagementAuto-check passed
  • LLM Wiki

    zosmaai/pi-llm-wiki

    Build and maintain a persistent, interlinked Obsidian-compatible markdown wiki using Karpathy's LLM Wiki pattern.

    608 GitHub stars~4.4k tokensUpdated today
    Knowledge ManagementAuto-check passed
  • LLM Wiki

    praneybehl/llm-wiki-plugin

    Build and maintain an LLM-curated knowledge base from papers, articles, transcripts, notes and project findings.

    118 GitHub stars~5.7k tokensUpdated 27 days ago
    Knowledge ManagementAuto-check passed
  • Karpathy Wiki

    SherwinQ/karpathy-wiki

    A skill your agent uses when building or maintaining a personal knowledge base with LLM assistance.

    114 GitHub stars~967 tokensUpdated 5 mo ago
    Knowledge ManagementAuto-check passed
  • My LLM Wiki

    MartinLwx/dotfiles

    Provides access to the user's personal wiki, including notes, research, project documentation, decisions, and archived knowledge.

    140 GitHub stars~2.7k tokensUpdated yesterday
    Knowledge ManagementAuto-check passed
  • Sage Wiki

    xoai/sage-wiki

    Reference skill for sage-wiki — local-first knowledge graph with MCP server, REST API, compiled wiki, and Obsidian-compatible output.

    623 GitHub stars~2.4k tokensUpdated 4 days ago
    Knowledge ManagementAuto-check passed

More from Ar9av/obsidian-wiki

All 39 skills in this repo
  • Copilot History Ingest

    Ar9av/obsidian-wiki

    Ingest GitHub Copilot CLI/session history into Obsidian as distilled knowledge.

    3.5k GitHub stars~4.4k tokensUpdated 2 days ago
    Auto-check: notes
  • Hermes History Ingest

    Ar9av/obsidian-wiki

    Ingest Hermes agent history into Obsidian as distilled knowledge.

    3.5k GitHub stars~2.2k tokensUpdated 2 days ago
    Auto-check: notes
  • Obsidian Layout Adjustment

    Ar9av/obsidian-wiki

    Adjust the user's Obsidian visual layout with CSS snippets. An agent skill from Ar9av/obsidian-wiki.

    3.5k GitHub stars~2.5k tokensUpdated 2 days ago
    Auto-check passed
  • Openclaw History Ingest

    Ar9av/obsidian-wiki

    Ingest OpenClaw session/history data into Obsidian as distilled knowledge.

    3.5k GitHub stars~2.5k tokensUpdated 2 days ago
    Auto-check: notes
  • Wiki Capture

    Ar9av/obsidian-wiki

    Turn the current conversation or finding into a structured permanent wiki note.

    3.5k GitHub stars~4.3k tokensUpdated 2 days ago
    Auto-check: notes
  • Wiki Narrate

    Ar9av/obsidian-wiki

    Turn a wiki topic into a cited Markdown briefing, plain-language explanation, or progressive lecture.

    3.5k GitHub stars~1.7k tokensUpdated 2 days ago
    Auto-check passed

Works with

Questions about Codex History Ingest

What does Codex History Ingest do?

Ingest Codex CLI conversation/session history into Obsidian as distilled knowledge. Codex History Ingest is an agent skill from Ar9av/obsidian-wiki. Ingest Codex CLI conversation/session history into Obsidian as distilled knowledge.

When should I use Codex History Ingest?

Codex History Ingest fits situations like: mining ~/.codex sessions; transcript logs; use wiki-agent for targeted topic-only recall.

How do I install Codex History Ingest in Claude Code?

Run `npx skills add Ar9av/obsidian-wiki --skill codex-history-ingest -a claude-code`. Or copy the skill folder (.skills/codex-history-ingest in Ar9av/obsidian-wiki) into .claude/skills/codex-history-ingest in your project. Claude Code loads it when a task matches its description.

How do I install Codex History Ingest in Codex?

Run `npx skills add Ar9av/obsidian-wiki --skill codex-history-ingest -a codex`. Or copy the skill folder (.skills/codex-history-ingest in Ar9av/obsidian-wiki) into .agents/skills/codex-history-ingest in your project. Codex loads it when a task matches its description.

Can I use Codex History Ingest in Cursor, Gemini CLI or GitHub Copilot?

Cursor, Gemini CLI, GitHub Copilot and OpenCode also load SKILL.md folders. With the skills CLI, run `npx skills add Ar9av/obsidian-wiki --skill codex-history-ingest -a cursor` (or -a gemini-cli, github-copilot or opencode for the others). To copy it by hand, put the folder in .cursor/skills/codex-history-ingest, .gemini/skills/codex-history-ingest, .github/skills/codex-history-ingest and .opencode/skills/codex-history-ingest in your project.

What does Codex History Ingest need to run?

SKILL.md names no scripts, command-line tools or credentials: Codex History Ingest is instructions for the agent only.

Does Codex History Ingest access the network?

SKILL.md contains no URLs. Any network use would come from the scripts or tools the agent runs. This is read from the text; nothing was executed.

Is Codex History Ingest safe to install?

Our automated static check of SKILL.md found notes only (mentions a .env file), nothing it rates as a warning. It is not a guarantee. Review the folder before installing.

What licence does Codex History Ingest use?

Codex History Ingest is published under the MIT licence (the repository's licence). It allows redistribution, so the full SKILL.md is shown on this page.

How many tokens does Codex History Ingest use?

About 2.2k tokens (SKILL.md is roughly 8.6k characters). Agents keep only the skill's name and description in context until a task matches; then they load SKILL.md in full. Its references folder adds about 607 tokens, read only when the agent opens those files.

What are the alternatives to Codex History Ingest?

Skills that share tags, products or a category with Codex History Ingest: LLM Wiki (lewislulu/llm-wiki-skill, 655 stars), LLM Wiki (zosmaai/pi-llm-wiki, 608 stars), LLM Wiki (praneybehl/llm-wiki-plugin, 118 stars) and Karpathy Wiki (SherwinQ/karpathy-wiki, 114 stars). The comparison table on this page puts their stars, adoption, token cost, safety result and licence side by side.

Who maintains Codex History Ingest?

Ar9av (a GitHub user) maintains it in Ar9av/obsidian-wiki, which has 3,544 GitHub stars. The repository holds 39 skills in this directory. The repository was last updated on October 8, 2026.

Source: Ar9av/obsidian-wiki on GitHub. Facts on this page come from the repository at the commit we read; the author's words are quoted as theirs.