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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Writes statistical analysis code for experimental data, runs it through a four-round review, and reports effect sizes, p-values and confidence intervals. | lingzhi227/ | 390 | — | ~886 | Automated safety check: Pass | No licence | 7 mo ago |
| 2 | Runs exploratory data analysis on tabular data after you confirm each column's measurement level, then writes CSV tables and a narrative summary. | TyrealQ/ | 108 | — | ~1.1k | Automated safety check: Pass | MIT | 18 days ago |
| 3 | Extracts pixel, video-frame, speech, music and visual-semantic features from image, video and audio files for research datasets, using local tools or the Gemini API. | TyrealQ/ | 108 | — | ~2k | Automated safety check: Notes | MIT | 18 days ago |
| 4 | Trains LLMs with reinforcement learning using verl, from ByteDance's Seed team, with GRPO, PPO and other algorithms and swappable training and rollout backends. | Orchestra-Research/ | 13k | 2 repos | ~2.4k | Automated safety check: Pass | MIT | 3 mo ago |
| 5 | Runs differential gene expression analysis on bulk RNA-seq counts with PyDESeq2: design formulas, Wald tests, FDR correction and volcano or MA plots. | davila7/ | 33k | 11 repos | ~4k | Automated safety check: Pass | MIT | today |
| 6 | Consolidates BERTopic, LDA or NMF topic output into a theory-driven classification framework and writes the final labels back to an Excel file. | TyrealQ/ | 108 | — | ~1k | Automated safety check: Pass | MIT | 18 days ago |
| 7 | Generates 3D molecular conformers from SMILES strings or files with RDKit, keeps the lowest-energy one per molecule, and falls back to 2D coordinates when embedding fails. | jinzhezenggroup/ | 148 | — | ~2.4k | Automated safety check: Pass | LGPL-3.0 | 2 days ago |
| 8 | Computes RDKit physicochemical descriptors and molecular fingerprints from SMILES through a uv-run CLI script that skips and logs invalid molecules. | jinzhezenggroup/ | 148 | — | ~2.3k | Automated safety check: Pass | LGPL-3.0 | 2 days ago |
| 9 | 9.Scvelo Performs RNA velocity analysis with scVelo from spliced and unspliced single-cell RNA counts. | K-Dense-AI/ | 48k | 1 repo | ~3.1k | Automated safety check: Pass | BSD-3-Clause | 6 days ago |
| 10 | Production-ready genomics and epigenomics data processing for BixBench questions. | wu-yc/ | 1.1k | 2 repos | ~14k | Automated safety check: Pass | No licence | 6 mo ago |
| 11 | Query protein-protein and gene interaction databases (STRING, BioGRID, IntAct, SIGNOR, Reactome, HuRI, HuMAP, OmniPath, ConsensusPathDB, DIP). | GPTomics/ | 1.2k | 2 repos | ~5.3k | Automated safety check: Pass | MIT | 1 mo ago |
| 12 | Predicts absorption, distribution, metabolism, excretion and toxicity for drug candidates with ADMETlab 3.0, ADMET-AI, DeepChem and chemprop, plus druglikeness filters. | GPTomics/ | 1.2k | 1 repo | ~5k | Automated safety check: Pass | MIT | 1 mo ago |
| 13 | Handles BED-format genomic intervals (BED3 through BED12, narrowPeak/broadPeak) and the coordinate-system substrate the whole interval category rests on, with bedtools (CLI) and… | GPTomics/ | 1.2k | 1 repo | ~4.5k | Automated safety check: Pass | MIT | 1 mo ago |
| 14 | 14.Geo Database NCBI GEO access via GEOparse and E-utilities. An agent skill from jaechang-hits/SciAgent-Skills. | jaechang-hits/ | 374 | 2 repos | ~4.3k | Automated safety check: Pass | MIT | 12 days ago |
| 15 | Core Python library for astronomy/astrophysics: units with dimensional analysis, celestial coordinate transforms (ICRS/Galactic/AltAz/FK5), FITS I/O, tables (FITS/HDF5/VOTable/CSV), cosmology… | jaechang-hits/ | 374 | 1 repo | ~5.5k | Automated safety check: Pass | BSD-3-Clause | 12 days ago |
| 16 | A skill your agent uses for RDKit data-file discovery, pharmacophore feature-definition files, PandasTools molecule DataFrames, lightweight database helpers, and public CLI-style integration… | VectorSpaceLab/ | 331 | — | ~946 | Automated safety check: Pass | BSD-3-Clause | 1 mo ago |