NetworkX

Comprehensive toolkit for creating, analyzing, and visualizing complex networks and graphs in Python.

zLanqing/codex-claude-academic-skills

Guide for using OptimusKG, the biomedical knowledge graph, through the optimuskg Python client.

mims-harvard/OptimusKG

Create publication-quality scientific diagrams, flowcharts, and schematics using Python (graphviz, matplotlib, schemdraw, networkx).

jimmc414/Kosmos

Drug-discovery knowledge-graph workflow guide for assembling drug-target-disease-pathway relationship graphs from OpenTargets GraphQL, ChEMBL REST, STRING PPI, and Reactome pathway APIs, then…

DrugClaw/DrugClaw

Adds a new visualization engine or style to the visualization module.

FabioYanezRomero/Knowledge-Graph-Builder

Creates, analyzes, and visualizes complex networks and graphs in Python with NetworkX.

K-Dense-AI/scientific-agent-skills

GPU-accelerates scientific Python on NVIDIA hardware and verifies that the result is correct and faster.

K-Dense-AI/scientific-agent-skills

Supports PyTorch Geometric (PyG) graph neural networks — node/link/graph classification, message passing (GCN, GAT, GraphSAGE, GIN), heterogeneous graphs, neighbor sampling, and custom datasets.

K-Dense-AI/scientific-agent-skills

Build an automated adversary infrastructure tracking system in Python (dnspython, python-whois, shodan, networkx) that pivots across passive DNS, certificate transparency logs, WHOIS records, and IP…

mukul975/Anthropic-Cybersecurity-Skills

Visualize biological networks (PPI, gene-regulatory, co-expression, pathway) with layout algorithm choice (ForceAtlas2, Fruchterman-Reingold, Kamada-Kawai, hive plots), edge bundling…

GPTomics/bioSkills

Query protein-protein and gene interaction databases (STRING, BioGRID, IntAct, SIGNOR, Reactome, HuRI, HuMAP, OmniPath, ConsensusPathDB, DIP).

GPTomics/bioSkills

Graph and network analysis toolkit. An agent skill from jaechang-hits/SciAgent-Skills.

jaechang-hits/SciAgent-Skills

PyTorch Geometric (PyG) for graph neural networks: node/graph classification, link prediction with GCN, GAT, GraphSAGE, GIN.

jaechang-hits/SciAgent-Skills

GPU-accelerate Python code using CuPy, Numba CUDA, Warp, cuDF, cuML, cuGraph, KvikIO, cuCIM, cuxfilter, cuVS, cuSpatial, and RAFT.

majiayu000/claude-skill-registry