Model Context Protocol · By K-Dense-AI

Convert heterogeneous documents and selected URIs to Markdown with Microsoft MarkItDown for text analysis, search, and LLM/RAG ingestion.

K-Dense-AI/claude-scientific-writer

Builds, registers, debugs, and operates bioinformatics workflows on Latch using the Python SDK, CLI, Latch Data and Registry, Nextflow, Snakemake, programmatic execution, and Latch MCP.

K-Dense-AI/scientific-agent-skills

Reads, validates, and safely exports protocols.io data with current official REST/MCP contracts, or creates non-executing mutation plans.

K-Dense-AI/scientific-agent-skills

Builds with and operates Pi, the minimal terminal coding harness.

K-Dense-AI/scientific-agent-skills

Provides access to a collection of open-source molecular design and structural biology tools on the Tamarind Bio platform, via its REST API or MCP server — no local GPUs required.

K-Dense-AI/scientific-agent-skills

Searches BGPT scientific papers by topic or DOI and retrieves claim-level evidence extracted from full text, including experiments, reported statistics, scope, limitations, and provenance.

K-Dense-AI/scientific-agent-skills

Predicts regulatory features, gene structure, and expression directly from DNA sequence using Genomic Intelligence's hosted transformer DNA language models — no local GPU or model weights.

K-Dense-AI/scientific-agent-skills

Queries and downloads public cancer imaging data from NCI Imaging Data Commons.

K-Dense-AI/scientific-agent-skills

Retrieves ClinGen gene-disease validity assertions for a public gene or disease, and reviews source-linked public evidence and literature for one supported GRCh38 germline nuclear SNV or simple…

K-Dense-AI/scientific-agent-skills