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Research & Science · Java · For researchers
4 skills found.
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | 1.Fastreer Phylogenetic distance matrices and trees from VCF or FASTA data using the fastreeR hybrid Java/Python toolkit (VCF2TREE, VCF2DIST, DIST2TREE, FASTA2DIST). | ClawBio/ | 1.2k | 1 repo | ~3.5k | Automated safety check: Notes | GPL-3.0 | 2 days ago |
| 2 | Computes immune-repertoire diversity, clonal structure, overlap, and segment usage from TCR/BCR clonotype tables with VDJtools (immunarch as the modern R alternative). | GPTomics/ | 1.2k | 1 repo | ~4.5k | Automated safety check: Pass | MIT | 1 mo ago |
| 3 | 3.Pymoo Python framework for single- and multi-objective optimization with evolutionary algorithms. | jaechang-hits/ | 374 | 1 repo | ~4.9k | Automated safety check: Pass | Apache-2.0 | 12 days ago |
| 4 | Annotate and filter VCF variants with SnpEff and SnpSift. An agent skill from jaechang-hits/SciAgent-Skills. | jaechang-hits/ | 374 | 1 repo | ~5.4k | Automated safety check: Pass | MIT | 12 days ago |
