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Data & Analytics · NCBI
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Load when converting Ensembl, Entrez or symbol IDs in a bulk RNA count matrix using an explicit mapping or a small human demo reference. | TianGzlab/ | 161 | — | ~1.2k | Automated safety check: Pass | Apache-2.0 | 3 days ago |
| 2 | In recent years a wealth of biological data has become available in public data repositories. | bioMate-AI/ | 804 | — | ~4.5k | Automated safety check: Pass | Unknown | 3 mo ago |
| 3 | ETE (Environment for Tree Exploration) toolkit for phylogenetic and hierarchical tree analysis; use it when you need to parse/manipulate Newick/NHX trees, detect duplication/speciation events… | aipoch/ | 1.9k | — | ~1.4k | Automated safety check: Pass | MIT | 24 days ago |
| 4 | Build restriction maps showing enzyme cut positions and inter-site distances along DNA using Biopython Bio.Restriction. | GPTomics/ | 1.2k | 1 repo | ~2.3k | Automated safety check: Pass | MIT | 1 mo ago |
| 5 | Retrieves comprehensive gene information including PubMed publication counts, NCBI summaries, and Ensembl transcript data. | aipoch/ | 1.9k | — | ~2.3k | Automated safety check: Pass | MIT | 24 days ago |
| 6 | Use Biopython to read/write/convert biological sequence files (FASTA/GenBank/FASTQ, etc.) and perform basic sequence operations; use when you need reliable sequence I/O, lightweight sequence… | aipoch/ | 1.9k | — | ~2.1k | Automated safety check: Pass | MIT | 24 days ago |
| 7 | A skill for performing sequence alignment using NCBI BLAST API. | aipoch/ | 1.9k | — | ~2.3k | Automated safety check: Pass | MIT | 24 days ago |
