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Data & Analytics · By ClawBio
Skills
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| # | Skill | Repository | Stars | Used in | Tokens | Auto-check | Licence | Updated |
|---|---|---|---|---|---|---|---|---|
| 1 | Fetch a region of cis-eQTL summary statistics from EBI eQTL Catalogue v7+ via tabix-on-FTP. | ClawBio/ | 1.2k | 1 repo | ~4.7k | Automated safety check: Pass | MIT | today |
| 2 | Fetch a region of GWAS summary statistics from the NHGRI-EBI GWAS Catalog harmonised collection via tabix-on-FTP. | ClawBio/ | 1.2k | 1 repo | ~3.5k | Automated safety check: Pass | MIT | today |
| 3 | 3.Dnasp Population genetics of pre-aligned DNA sequences or multi-sample VCFs using selected DnaSP 6 methods. | ClawBio/ | 1.2k | — | ~5.1k | Automated safety check: Pass | MIT | today |
| 4 | Fetch a regional slice of plasma pQTL summary statistics from the UK Biobank Pharma Proteomics Project (UKB-PPP; Sun 2023 Nature) for a specific (protein, ancestry) measurement. | ClawBio/ | 1.2k | — | ~4.6k | Automated safety check: Pass | MIT | today |
| 5 | Fast genomic interval operations (overlap, nearest, merge, coverage, cluster, complement, subtract, count-overlaps), multi-format bioinformatics I/O, DataFusion SQL, and pileup on Polars DataFrames… | ClawBio/ | 1.2k | — | ~3.4k | Automated safety check: Pass | Apache-2.0 | today |
| 6 | End-to-end GWAS automation wrapping PLINK2 for genotype QC and REGENIE for two-step whole-genome regression association testing. | ClawBio/ | 1.2k | 1 repo | ~1.4k | Automated safety check: Pass | MIT | today |
| 7 | Two-sample Mendelian Randomisation from GWAS summary statistics with IVW, MR-Egger, weighted median/mode, and full sensitivity analysis (Cochran Q, Egger intercept, Steiger, F-statistic… | ClawBio/ | 1.2k | 1 repo | ~4.5k | Automated safety check: Pass | MIT | today |
| 8 | 8.Nutrigx Personalised nutrition report from consumer genetic data (23andMe, AncestryDNA, VCF) — interrogates nutritionally-relevant SNPs and generates actionable dietary guidance, all computed locally. | ClawBio/ | 1.2k | 1 repo | ~3.7k | Automated safety check: Pass | MIT | today |
| 9 | Automated sequencing quality control and advanced visualization wrapping FastQC, MultiQC, and custom chart generation. | ClawBio/ | 1.2k | — | ~2.2k | Automated safety check: Pass | MIT | today |
| 10 | Extract numerical data from scientific figure images using Claude vision + OpenCV calibration. | ClawBio/ | 1.2k | — | ~801 | Automated safety check: Pass | MIT | today |
